Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 159 3e-34
>seq17438
Length=17193109
Score = 159 bits (176), Expect = 3e-34
Identities = 213/289 (74%), Gaps = 8/289 (3%)
Strand=Plus/Plus
Query 5503 GCCCGTGGACCCGAATCC-GCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561
||| || || || || || |||| |||| | ||| || || ||||| | |||| |
Sbjct 7488484 GCCAGTTGAACCAAAGCCAGCCT-CGCCGCGTTCGGTGTCCTCCAGTTTGTCGACCTGCT 7488542
Query 5562 CCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620
||| ||| || | | || ||||||||| || | ||| ||||| || ||||| ||||
Sbjct 7488543 CCAGATCCGGATA-GAAGATGCGCTCGCAAATGAACTGTGCTATGCGATCGCCACGCTTT 7488601
Query 5621 ACCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGT 5678
||||| || ||| || ||||| ||||||||| || || |||| |||||||||||| |
Sbjct 7488602 ACCTCAAAGTCGGCGT--CCGAATGGTTGAACAGGACAACACCCAGGTTGCCGCGGTAAT 7488659
Query 5679 CGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGG 5738
| |||||| || || ||||| || |||||||||| ||| || |||||||| || || |
Sbjct 7488660 CCTCGTCTACAACCCCGGCGCCTACATCGATGAAGTTCTTCACGGCCAGGCCCGAACGTG 7488719
Query 5739 GAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787
| ||||| ||||| ||| | || ||||| | ||| | |||||| || ||
Sbjct 7488720 GCGCCACTCGGCCATAGGAGCCCTCGGGCACCTGCACCTGCAGATCAGT 7488768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429962991937280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |