Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 95.1 2e-14
>seq17438
Length=17193109
Score = 95.1 bits (104), Expect = 2e-14
Identities = 200/294 (68%), Gaps = 12/294 (4%)
Strand=Plus/Plus
Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATG----GATTCCA 193936
|| ||| |||| || | |||||| | | |||||||| ||| | || | | || |
Sbjct 12182689 GCCAAGATGTACGGGTTTTGGATTGTGATCAATTATCGGGAGGCGTACGACATGTTTGCC 12182748
Query 193937 CGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAAC 193996
|| | ||| || |||||||||||||| ||| || | || |||| ||||| ||
Sbjct 12182749 TGCAA----TGGCATACTCTTCAATCACGAGAGTCCGCGACGTGGCGAGAATTTTGTGAC 12182804
Query 193997 TCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACA--GAAGATTCTTTAT 194054
|| ||||| || | | | | ||||||| ||| | || | | ||| ||| || |
Sbjct 12182805 ACGCAAGATAACGCGATCTGTGGCTAAGAT-ACTGCTCAATCAAATGGAATATT-TTGAG 12182862
Query 194055 CTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATG 194114
|| || ||| | | | ||| | |||||||| || || | |||||||| || || |||
Sbjct 12182863 CTGGGCAATTTGGACTCGAAGCGAGATTGGGGCCATGCCAGCGATTATGTGGAGGCTATG 12182922
Query 194115 TGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168
||| | ||| |||||| |||||| || |||||||| ||||| || || |||
Sbjct 12182923 TGGATGATGCTGCAACGGGATGAGCCATCGGATTATGTCATTGCCACTGGGGAA 12182976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807379152966400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |