Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq17440 95.1 1e-14 >seq17440 Length=24565398 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 38456 CATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCGGGCACCGGAGA 38515 |||||| || | ||| |||||| | |||||||| || ||||||||| ||||| || || Sbjct 4988432 CATGAAACAAAAGCCCCAACAGCTCGCCGAGGCGGGTTTCTACTATACGGGCGTTGGCGA 4988373 Query 38516 CCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGATCC 38575 | || |||||| ||||||||||||| | ||||||||||| | |||||| || Sbjct 4988372 TCGCGTTCGCTGTTTCAGTTGCGGCGGCGGCTTAAAGGACTGGGACGATCAGGACGAACC 4988313 Query 38576 GTGGGCGCAGCACGCGCGCTGG 38597 |||| ||||| || | |||| Sbjct 4988312 CTGGGAACAGCATGCCCTCTGG 4988291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537486002502400