Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq17440 93.3 4e-14
>seq17440
Length=24565398
Score = 93.3 bits (102), Expect = 4e-14
Identities = 229/346 (66%), Gaps = 5/346 (1%)
Strand=Plus/Plus
Query 107448 ATTCCAATAATTCCGCAGCCCAAGCGGCCCCCCGAATTGCCTGTCGTTTTGCTAAGTGGG 107507
|| ||||||| |||||||| | ||| | || | ||| || || || ||||| || |
Sbjct 18410033 ATGCCAATAACACCGCAGCCAATGCGAGCGCCAGCATTTCCAGTTGTCTTGCTCAGCTCG 18410092
Query 107508 TGGTCGGTAAGGCCCAGGTCGTCGCGGTCCGTGTGCACGACCAAACTACGGCCCAGAATA 107567
||| || ||||| || ||| | || | || ||||| | | || || | |||
Sbjct 18410093 TGGCCGCCCTTGCCCAAATCATCGGGATCAGCATGGACGACAACTGTGCGTCCGATAATG 18410152
Query 107568 CTCAGCGGGCCGTACAAACTGATTACGTTATCGCTCATGTTTATTGGCGTAAGCGCGGTG 107627
|| | || |||| |||| | |||||| | ||||| | || || | | ||
Sbjct 18410153 CTGTTGGCACCAAACAACGTGATCTCTTTATCGGTGATGTTAACCGGAGTGGGTCCATTG 18410212
Query 107628 C-AGCCGACGGAGCGCACGTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGC 107686
| || | || | ||||||||||||||| | ||||| | | || || ||
Sbjct 18410213 CCAGTAGCCGTT----ATGTTGCCCAAATCGCCTAGATGACGAACGCCATCGGTTGGTGC 18410268
Query 107687 GCCATGCTGCTGATGCGTAGGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGT 107746
|||||||| || || |||||||||||| || | |||| |||| || || | |
Sbjct 18410269 GCCATGCTCCTTCTGGTGAGGATTAAAGTGCGGCCCCGACGACATGCATCCGTTTGTATT 18410328
Query 107747 GTCGCCAAATTCGTGCACGTGAAAACCGTGCAAGCCGCGCGGCAAA 107792
|||||||||||| ||||| || || ||||||||||| ||| ||||
Sbjct 18410329 GTCGCCAAATTCATGCACATGGAAGCCGTGCAAGCCTTGCGCCAAA 18410374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422950082848000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |