Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq17435 86.0 2e-13 >seq17435 Length=10151454 Score = 86.0 bits (94), Expect = 2e-13 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 3346 GTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAA 3405 |||||||||| | |||| |||||| || |||||||| ||||| || ||| | || || Sbjct 4220370 GTCTTTCCAAAAGTCACCAAATGTACATTCCACAAATATGGTCCATCTGGCGGCGTGCAA 4220429 Query 3406 AACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTC 3465 || | ||| || ||||| | || || || | ||||||||||||||||| | ||| Sbjct 4220430 AAGTTCGACGGCCTCTGTGTGCTACCCCTAAATATTGTCAACGAGAAGATCTATGTGTTC 4220489 Query 3466 CTCTGGTTCTGGTTC 3480 | ||||||||| || Sbjct 4220490 TTGTGGTTCTGGCTC 4220504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477619440000