Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 91.5 3e-13
>seq17438
Length=17193109
Score = 91.5 bits (100), Expect = 3e-13
Identities = 301/458 (66%), Gaps = 10/458 (2%)
Strand=Plus/Plus
Query 297253 TGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAA-CCATTCA 297311
|||||| ||| | | || || || ||||| ||||| || || || |||| ||||| |
Sbjct 4176735 TGGATTATAATTGGCTATCTTGGTGGACCAGCCGGTGCCAATGCC-CTCGGCGCCATTAA 4176793
Query 297312 CCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCAT 297371
|||||| |||| || | || | ||| | ||| || || | || |||||
Sbjct 4176794 CCAGAACCATCGGTATGATGGGTATATACCAAAGTGGCTCAATGCGCTGTCCATCATCTG 4176853
Query 297372 ACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAA-ACCTGTCGAGTCTGAGGGTTC 297430
| |||| | ||| || ||| ||| || || || | | | || ||| | || |
Sbjct 4176854 TCTGATACTGCAGCAGTGGATCATCCA-ATGGATGATAGATGAGACGGGTCAGCGGCGAC 4176912
Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490
| | |||||||||||| || |||||||| ||| || || ||| ||| | | ||||
Sbjct 4176913 ATTAATGTGAAAATATAACGAGCACTCGCACAATCTTTGCCGCCCGTCAAACGTGTACCG 4176972
Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550
||||| || ||| || | | ||||| || || || ||||| | ||| || ||
Sbjct 4176973 AACTGACCGCGTGGCTCCAGCAAATTGATATTGTTTGAGCCCACATAGTTCTGCGCCAGA 4177032
Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC-GCTATGCTCTGCAAC 297609
||||| || ||| ||||| || | ||||| || |||||||| | || || || ||
Sbjct 4177033 TTCACAATCGTCATCTGCAGCGACACCTCGCCGTGATGATAGGCAGACAT-TTCGGCCAC 4177091
Query 297610 GTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA--AGCTGAA 297667
|||| | ||| || |||||||| ||| | | || |||||||| | |||
Sbjct 4177092 CGAACCCGATAGCTGAGCCACCTTCACCTCGCGCTTATCGTTACGCTTGAAGCACGTGA- 4177150
Query 297668 TATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAAC 297705
| |||||||| || || |||||||| ||||| ||
Sbjct 4177151 -ACATCACTTTGCGCTGGCCAGGTTTGAGGCCATCCAC 4177187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102633561464000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |