Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 150 2e-31
>seq17438
Length=17193109
Score = 150 bits (166), Expect = 2e-31
Identities = 294/426 (69%), Gaps = 14/426 (3%)
Strand=Plus/Plus
Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807
|| |||||||| || |||| ||| || || |||||||| || | | || ||||| |
Sbjct 4176766 CCGGTGCCAATGCCCTCGGCGCCATTAACCAGAACCATCGGTATGATGGGTATATACCAA 4176825
Query 175808 TCTGGTTCAATCGCAC-GCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGG 175866
||| ||||| || | | |||||||| | ||| | |||| || |||||| ||
Sbjct 4176826 AGTGGCTCAAT-GCGCTGTCCATCATCTGTCTGATACTGCAGCAGTGGATCATCCAATGG 4176884
Query 175867 ATCAAAGATTTTACGAGCATCCTTGGTGAGTTT--TGTGAAGATGTACCTCGTTTGAGAC 175924
|| | |||| ||| | || || || || |||||| || || | | | |
Sbjct 4176885 ATGATAGATGAGACGGG--TCAGCGGCGACATTAATGTGAAAATATAACGAGC---ACTC 4176939
Query 175925 GCA---TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
||| |||||||| ||| | | ||| || || || ||||| | |||||| || | ||||
Sbjct 4176940 GCACAATCTTTGCCGCCCGTCAAACGTGTACCGAACTGACCGCGTGGCTCCAGCAAATTG 4176999
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGAC 176040
|||||||||||||||| ||||| | ||||| || |||||||| ||| || || || ||
Sbjct 4177000 ATATTGTTTGAGCCCACATAGTTCTGCGCCAGATTCACAATCGTCATCTGC-AGCGACAC 4177058
Query 176041 TTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCAT 176100
|| |||||||| ||||| ||| | || ||||| | ||| | ||| ||||||||||
Sbjct 4177059 CTCGCCGTGATGATAGGCAGACATTTCGGCCACCGAACCCGATAGCTGAGCCACCTTCAC 4177118
Query 176101 CTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAG 176160
||| ||| ||| | |||||||| |||| || || | ||| ||| |||||
Sbjct 4177119 CTCGCGCTTATCGTTACGCTTGAAGCACGTGAACATCACTTTGCGCTGGCCAGGTTTGAG 4177178
Query 176161 GCCGTC 176166
||| ||
Sbjct 4177179 GCCATC 4177184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613373455430400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |