Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq17434 104 3e-17
>seq17434
Length=8399593
Score = 104 bits (114), Expect = 3e-17
Identities = 290/437 (66%), Gaps = 10/437 (2%)
Strand=Plus/Plus
Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457
|| ||||| ||||||||||||||| ||||| || ||||| || ||||| | ||| | |||
Sbjct 1622274 CGGCTTCGTGCGAAGATAATACATTCCCGTCTTAAGACCGGCTTTCCACGAGTAAAAATG 1622333
Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTC-TCCATAAACAAGTTCATCGACTGAGACT 109516
|| || | ||||| | | || || ||| ||| | | ||| | ||||||| |
Sbjct 1622334 GATCGATGTCAGTTT-GCCATAGTTGGGCTCAGCCACATGTATGTTGAACGACTGACTTT 1622392
Query 109517 GATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTT---GGCTAATTT 109573
|||| |||||| || ||||| || ||||| | ||| | |||| || | ||||
Sbjct 1622393 GATCAATGAATGCCCCGCGATCGGCTGCCATTTTGATCGT--TGTTTTCACGGAT-ATTT 1622449
Query 109574 CCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAG 109633
|||| || ||||| |||| || | | | || | || ||| |||||||||| || |
Sbjct 1622450 CCCACACGGTCTTATACAGATCCCTCACATTTTTTGGTATGGATTCGATGTTTTGTATTG 1622509
Query 109634 AGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693
| || | | | || ||| |||||| || | ||| | | | || | |
Sbjct 1622510 ATCCTCGACTGGCGATTATTTGATTCTTCATATCATCATCCCACAAGTCCAGCTCCGTTA 1622569
Query 109694 GATC-GTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752
||| |||||| ||| | || ||||| || ||||| | || ||||||| |
Sbjct 1622570 AATCACGCAACAA-ATGATGATTCACCACCTGGAACTCACCGGACAGCACGCGTCGGGTG 1622628
Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812
|||||||| | || || || || || | ||||| ||||| | ||||| || || ||
Sbjct 1622629 TAGATGTTTGAGGTATACGGCTCAAACGATTCATTATTGCCCATTATTTGAGCCGTAGAT 1622688
Query 109813 GCTGTGGGCATGGGAGC 109829
|| || |||||||| ||
Sbjct 1622689 GCGGTTGGCATGGGCGC 1622705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588847603232000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |