Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17434 104 3e-17 >seq17434 Length=8399593 Score = 104 bits (114), Expect = 3e-17 Identities = 290/437 (66%), Gaps = 10/437 (2%) Strand=Plus/Plus Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457 || ||||| ||||||||||||||| ||||| || ||||| || ||||| | ||| | ||| Sbjct 1622274 CGGCTTCGTGCGAAGATAATACATTCCCGTCTTAAGACCGGCTTTCCACGAGTAAAAATG 1622333 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTC-TCCATAAACAAGTTCATCGACTGAGACT 109516 || || | ||||| | | || || ||| ||| | | ||| | ||||||| | Sbjct 1622334 GATCGATGTCAGTTT-GCCATAGTTGGGCTCAGCCACATGTATGTTGAACGACTGACTTT 1622392 Query 109517 GATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTT---GGCTAATTT 109573 |||| |||||| || ||||| || ||||| | ||| | |||| || | |||| Sbjct 1622393 GATCAATGAATGCCCCGCGATCGGCTGCCATTTTGATCGT--TGTTTTCACGGAT-ATTT 1622449 Query 109574 CCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAG 109633 |||| || ||||| |||| || | | | || | || ||| |||||||||| || | Sbjct 1622450 CCCACACGGTCTTATACAGATCCCTCACATTTTTTGGTATGGATTCGATGTTTTGTATTG 1622509 Query 109634 AGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693 | || | | | || ||| |||||| || | ||| | | | || | | Sbjct 1622510 ATCCTCGACTGGCGATTATTTGATTCTTCATATCATCATCCCACAAGTCCAGCTCCGTTA 1622569 Query 109694 GATC-GTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752 ||| |||||| ||| | || ||||| || ||||| | || ||||||| | Sbjct 1622570 AATCACGCAACAA-ATGATGATTCACCACCTGGAACTCACCGGACAGCACGCGTCGGGTG 1622628 Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812 |||||||| | || || || || || | ||||| ||||| | ||||| || || || Sbjct 1622629 TAGATGTTTGAGGTATACGGCTCAAACGATTCATTATTGCCCATTATTTGAGCCGTAGAT 1622688 Query 109813 GCTGTGGGCATGGGAGC 109829 || || |||||||| || Sbjct 1622689 GCGGTTGGCATGGGCGC 1622705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588847603232000