Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq17437 89.7 6e-13 >seq17437 Length=14172833 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 159613 GTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGT 159672 || ||| || | || || ||||| ||||| || ||||| ||| | || || ||||| ||| Sbjct 5220805 GTGCATAAGCACGGCGGCCAGGTGTATCTGGACGGTGCCAATATGAACGCCCAGGTGGGT 5220864 Query 159673 CTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTC 159732 || || | |||||||| ||||| | ||||| || | || ||||||||| Sbjct 5220865 CTGTGCCGGCCCGGCGACTATGGCAGCGATGTCTCCCATCTGAATCTGCACAAGACATTC 5220924 Query 159733 TGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || ||||||||||| || || ||||| || | ||||| || ||||| Sbjct 5220925 TGCATTCCACATGGCGGCGGTGGTCCCGGAATGGGTCCCATCGGTGT 5220971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587923004838400