Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq17439 104 3e-17 >seq17439 Length=18325388 Score = 104 bits (114), Expect = 3e-17 Identities = 523/818 (64%), Gaps = 18/818 (2%) Strand=Plus/Plus Query 36888 TGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTC 36946 |||||||| || ||| |||| || |||||||| || || || || | ||| || |||| Sbjct 9056302 TGATATTCGCCCACTT-TCTTCTCAAAAAAATTGGTTTTACCGTCCAATGAAATCATTTC 9056360 Query 36947 CATAAAATCAAATGGATTAGATGTATTATATATAGTACT-ACATGATAATTCCTTCAGAA 37005 ||| ||| ||||||||| ||| |||||||| ||| ||| | ||| || | Sbjct 9056361 CATGAAAGTAAATGGATTCTTTGTGTTATATATTTTACCGACACCG-AGCTCCACCAACA 9056419 Query 37006 GCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTT 37065 | ||| || || || || || |||| |||| || || | || || ||||| || | Sbjct 9056420 AGCGATCGGCCACGAACTCAATATATTCGGACATCAGCGCACAATTCATGCCAATCAGAT 9056479 Query 37066 TTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATAT 37125 |||| || | || || ||||| | || || | |||||||| || || | Sbjct 9056480 TTACAGGCAAAGCGTCAGTGAGAAACTCCTGCTCAATAGTCACAGCATCCGAGACGATCT 9056539 Query 37126 TAACAATAACTTCTTCAGTTGGGG-GATATTTTAAATATTTAAACA--ATAAACATGCAA 37182 || || ||| | | |||| | | | | | |||| |||| | |||| Sbjct 9056540 CAATGATGCGTTCA-CGGCTGGGACGCTGCACCAGGTGCTGGAACATCATAACC--GCAA 9056596 Query 37183 AATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCA 37242 | || ||||| | || ||||| | || | || || || || || | || |||| Sbjct 9056597 AGTCGCAATGCAGCCCCTCATCACGGGAGATGAGCTCGTTTGAGAAAGTCAGACCGGGCA 9056656 Query 37243 TTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTT 37302 ||| || | ||||||| ||| || || | |||||| || |||||| || |||| Sbjct 9056657 TTAGGCCACGCTTTTTAAGCCAGAAGATGGAGGCAAAACTGCCGCTAAAGAAGATGCCTT 9056716 Query 37303 CAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA---CTATAATCAGAAATCC 37359 | || || || || || | || || | || ||||||| || || ||||||| Sbjct 9056717 CGACGGCAGCGAAGGCAATAATGCGC-TCCCCAAAGTTGGCAGCCTTGGAT--GAAATCC 9056773 Query 37360 AtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGA 37419 | | ||| || ||||| || ||| ||||||||||| || || |||| Sbjct 9056774 AAGAGAGCGCCCAGTCCGCCTTACGCTTTACAGCCGGCATTGTTTCAATAGCATTGAAGA 9056833 Query 37420 GAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAG 37479 || | | | | | |||| |||||||| || ||||| | ||| ||||| || | Sbjct 9056834 GATAATCGCGCTGATGAGGATCTCGGATATAAGTGTCGATTAGCACACTGTACATCTCTG 9056893 Query 37480 AGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGA 37538 |||| | ||| || || || |||||||||||||| || || | || || | |||| || Sbjct 9056894 AGTGTACATTCTCCATGGCAATCTGAAAACCATAGAAGCAGCGCGCCTCTG-TAATCTGC 9056952 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || || | ||| | || | | | || || ||||| || ||||| || || ||| Sbjct 9056953 ACTTCCTGGCTAAAGCGCTCAACCAGATTCTCGTTAACAATGCCATCGGAGGCGGCGAAG 9057012 Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTA 37658 ||||| | |||| | || ||||| | |||| | || ||| | ||| || | Sbjct 9057013 AAAGCCAACACATGTGAAATGAAATGACGCTCATTGTCTGTTAAGCGTACCCAGTCCGTC 9057072 Query 37659 ATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 || || || |||| ||| || || || || ||||| || Sbjct 9057073 ATGTCCTTGGATAGATCCACCTCCTCCACAGTCCAGAA 9057110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592187674937600