Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq17439 104 3e-17
>seq17439
Length=18325388
Score = 104 bits (114), Expect = 3e-17
Identities = 523/818 (64%), Gaps = 18/818 (2%)
Strand=Plus/Plus
Query 36888 TGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTC 36946
|||||||| || ||| |||| || |||||||| || || || || | ||| || ||||
Sbjct 9056302 TGATATTCGCCCACTT-TCTTCTCAAAAAAATTGGTTTTACCGTCCAATGAAATCATTTC 9056360
Query 36947 CATAAAATCAAATGGATTAGATGTATTATATATAGTACT-ACATGATAATTCCTTCAGAA 37005
||| ||| ||||||||| ||| |||||||| ||| ||| | ||| || |
Sbjct 9056361 CATGAAAGTAAATGGATTCTTTGTGTTATATATTTTACCGACACCG-AGCTCCACCAACA 9056419
Query 37006 GCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTT 37065
| ||| || || || || || |||| |||| || || | || || ||||| || |
Sbjct 9056420 AGCGATCGGCCACGAACTCAATATATTCGGACATCAGCGCACAATTCATGCCAATCAGAT 9056479
Query 37066 TTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATAT 37125
|||| || | || || ||||| | || || | |||||||| || || |
Sbjct 9056480 TTACAGGCAAAGCGTCAGTGAGAAACTCCTGCTCAATAGTCACAGCATCCGAGACGATCT 9056539
Query 37126 TAACAATAACTTCTTCAGTTGGGG-GATATTTTAAATATTTAAACA--ATAAACATGCAA 37182
|| || ||| | | |||| | | | | | |||| |||| | ||||
Sbjct 9056540 CAATGATGCGTTCA-CGGCTGGGACGCTGCACCAGGTGCTGGAACATCATAACC--GCAA 9056596
Query 37183 AATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCA 37242
| || ||||| | || ||||| | || | || || || || || | || ||||
Sbjct 9056597 AGTCGCAATGCAGCCCCTCATCACGGGAGATGAGCTCGTTTGAGAAAGTCAGACCGGGCA 9056656
Query 37243 TTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTT 37302
||| || | ||||||| ||| || || | |||||| || |||||| || ||||
Sbjct 9056657 TTAGGCCACGCTTTTTAAGCCAGAAGATGGAGGCAAAACTGCCGCTAAAGAAGATGCCTT 9056716
Query 37303 CAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA---CTATAATCAGAAATCC 37359
| || || || || || | || || | || ||||||| || || |||||||
Sbjct 9056717 CGACGGCAGCGAAGGCAATAATGCGC-TCCCCAAAGTTGGCAGCCTTGGAT--GAAATCC 9056773
Query 37360 AtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGA 37419
| | ||| || ||||| || ||| ||||||||||| || || ||||
Sbjct 9056774 AAGAGAGCGCCCAGTCCGCCTTACGCTTTACAGCCGGCATTGTTTCAATAGCATTGAAGA 9056833
Query 37420 GAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAG 37479
|| | | | | | |||| |||||||| || ||||| | ||| ||||| || |
Sbjct 9056834 GATAATCGCGCTGATGAGGATCTCGGATATAAGTGTCGATTAGCACACTGTACATCTCTG 9056893
Query 37480 AGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGA 37538
|||| | ||| || || || |||||||||||||| || || | || || | |||| ||
Sbjct 9056894 AGTGTACATTCTCCATGGCAATCTGAAAACCATAGAAGCAGCGCGCCTCTG-TAATCTGC 9056952
Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598
|| || | ||| | || | | | || || ||||| || ||||| || || |||
Sbjct 9056953 ACTTCCTGGCTAAAGCGCTCAACCAGATTCTCGTTAACAATGCCATCGGAGGCGGCGAAG 9057012
Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTA 37658
||||| | |||| | || ||||| | |||| | || ||| | ||| || |
Sbjct 9057013 AAAGCCAACACATGTGAAATGAAATGACGCTCATTGTCTGTTAAGCGTACCCAGTCCGTC 9057072
Query 37659 ATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
|| || || |||| ||| || || || || ||||| ||
Sbjct 9057073 ATGTCCTTGGATAGATCCACCTCCTCCACAGTCCAGAA 9057110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592187674937600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |