Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq11536 1590 0.0 >seq11536 Length=2982 Score = 1590 bits (1762), Expect = 0.0 Identities = 969/1026 (94%), Gaps = 1/1026 (0%) Strand=Plus/Plus Query 15637 GTGAGCCGTAATTATCATCTTCGCGGGCGTATTCTGCAGGTGCCGTCGAACTATAACCCG 15696 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1958 GTGAGCCGTA-TTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTATAACCCG 2016 Query 15697 CAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAGCCAGCATACAGCAACAAC 15756 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 2017 CAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAGCAACAAC 2076 Query 15757 ATGGCCTGGTGTCTGTGGGATATGCTGACCCACCCGCGCTACGGCATGGGTAAACGTCTT 15816 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 2077 ATGGCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAAACGTCTT 2136 Query 15817 GGTGCGGCAGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTGTTGCGACCAGTCG 15876 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2137 GGTGCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGACCAGTCA 2196 Query 15877 GTGCCGGACGGTTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCCTGGCTGACCACA 15936 ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 2197 GTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCTGACCACA 2256 Query 15937 CAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTATGCCGGTA 15996 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 2257 CAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTATGCCGGTA 2316 Query 15997 TGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCATCAGATAAGGTGTGGACCTAT 16056 |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| Sbjct 2317 TGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTGGACCTAT 2376 Query 16057 AACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTTCAGCGCC 16116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2377 AACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTTCAGCGCC 2436 Query 16117 CTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGGATAACGGCTGGGAG 16176 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 2437 CTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGGCTGGGAG 2496 Query 16177 ACGGCGACAGAGCTTGTGGAGGACACGCAAGCCATTGCCCGTTACGGTCGTAACGTCACG 16236 ||||||||||||||||| || || ||||| ||||||||||||||||||||||| || ||| Sbjct 2497 ACGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAATGTTACG 2556 Query 16237 AAGATGGATGCCTTTGGCTGTACCAGGCGGGGGCAGGCGCACCGCGCCGGGCTGTGGCTG 16296 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 2557 AAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCTGTGGCTG 2616 Query 16297 ATTAAAACGGAACTGCTGGAGACGCAGACCGTGGACTTCAGCGTGGGTGCCGAAGGGCTT 16356 |||||||| ||||||||||| |||||||||||||| |||||||| || || ||||||||| Sbjct 2617 ATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGAAGGGCTT 2676 Query 16357 CGCCATGTGCCGGGCGATGTTATTGAAATCTGTGATGATGACTATGCCGGTATCAGCACC 16416 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2677 CGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTATCAGCACC 2736 Query 16417 GGCGGGCGCGTGCTGGCGGTGAACAGCCAGACGCGGACACTGACGCTCGACCGTGAAATC 16476 || || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 2737 GGTGGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCGTGAAATC 2796 Query 16477 ACGCTGCCATCCTCCGGCACCACGCTGATAAGCCTGGTTGACGGGCAGGGTAATCCGGTG 16536 ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||| Sbjct 2797 ACGCTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAATCCGGTC 2856 Query 16537 AGCGTGGAGGTCCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGTTCCTGAC 16596 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2857 AGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGTTCCTGAC 2916 Query 16597 GGCGTTGCCGGATACAGCGTATGGGGGCTGAAGCTGCCGACGCTGCGCCAGCGCCTGTTC 16656 || ||||| | |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 2917 GGTGTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCGACTGTTC 2976 Query 16657 CGCTGC 16662 |||||| Sbjct 2977 CGCTGC 2982 Score = 930 bits (1030), Expect = 0.0 Identities = 588/634 (93%), Gaps = 2/634 (0%) Strand=Plus/Plus Query 15649 TATCATCTT-CGCGGGCGTATTCTGCAGGTGCCGTCGAACTATAACCCGCAGACGCGGCA 15707 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TATCATCTCGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTATAACCCGCAGACGCGGCA 60 Query 15708 ATACAGCGGTATCTGGGACGGAACGTTTAAGCCAGCATACAGCAACAACATGGCCTGGTG 15767 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 61 ATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAGCAACAACATGGCCTGGTG 120 Query 15768 TCTGTGGGATATGCTGACCCACCCGCGCTACGGCATGGGTAAACGTCTTGGTGCGGCAGA 15827 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || Sbjct 121 TCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAAACGTCTTGGTGCGGCGGA 180 Query 15828 TGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTGTTGCGACCAGTCGGTGCCGGACGG 15887 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 181 TGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGACCAGTCAGTGCCGGACGG 240 Query 15888 TTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCCTGGCTGACCACACAGCGTAAGGC 15947 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 241 CTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCTGACCACACAGCGTAAGGC 300 Query 15948 GTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTATGCC-GGTATGGAACGGGC 16006 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 301 GTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTATGCCGGGTATGGAACGGGC 360 Query 16007 AGACGCTGACGTTCGTGCAGGACCGACCATCAGATAAGGTGTGGACCTATAACCGCAGTA 16066 ||||||||||||||||||| |||||||| || |||||| |||||||||||||| | || Sbjct 361 AGACGCTGACGTTCGTGCATGACCGACCGTCGGATAAGACGTGGACCTATAACCTCTTTA 420 Query 16067 ATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTTCAGCGCCCTGAAGGACC 16126 ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| |||| Sbjct 421 ATGTGATGATGCCGGATGATGGCGCGCCTTTCCGCTACAGCTTCTTCGCCCTGAATGACC 480 Query 16127 GCCATAATGCCGTTGAGGTGAACTGGATTGACCCGGATAACGGCTGGGAGACGGCGACAG 16186 |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| Sbjct 481 GCCATAATGCCGTTGAGGTGAACTGGATTGACCCAAACAACGGCTGGGAGACTGCGACAG 540 Query 16187 AGCTTGTGGAGGACACGCAAGCCATTGCCCGTTACGGTCGTAACGTCACGAAGATGGATG 16246 ||||||| || | ||||| ||||||||| ||||| ||||||| || || |||||||||| Sbjct 541 AGCTTGTTGAATATACGCATGCCATTGCCTGTTACAGTCGTAATGTTACTAAGATGGATG 600 Query 16247 CCTTTGGCTGTACCAGGCGGGGGCAGGCGCACCG 16280 |||||||||||||||| ||||||||||| ||||| Sbjct 601 CCTTTGGCTGTACCAGCCGGGGGCAGGCACACCG 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142280927516160