Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq17437 91.5 2e-13 >seq17437 Length=14172833 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||| || ||||| | || ||||| || || ||||||||||| ||||||||||| || Sbjct 5220971 ACACCGATGGGACCCATTCCGGGACCACCGCCGCCATGTGGAATGCAGAATGTCTTGTGC 5220912 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | ||||| |||||||| | || ||||| ||||| || Sbjct 5220911 AGATTCAGATGGGAGACATCGCTGCCATAGTCGCCGGGCCGGCACAGACCCACCTGGGCG 5220852 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACC 138337 || | ||| ||||| || ||||| ||||| || || Sbjct 5220851 TTCATATTGGCACCGTCCAGATACACCTGGCCGCC 5220817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578872178348800