Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq17439 116 1e-20 >seq17439 Length=18325388 Score = 116 bits (128), Expect = 1e-20 Identities = 111/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || || |||| |||||||| | || ||||||||||| ||| ||||||||||||||| | Sbjct 9056732 GCCTTCGCTGCCGTCGAAGGCATCTTCTTTAGCGGCAGTTTT-GCCTCCATCTTCTGGCT 9056674 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||||||||||| || |||| ||||||||| || ||||| || ||| || || || Sbjct 9056673 TAAAAAGCGTGGCCTAATGCCCGGTCTGACTTTCTCAAACGAGCTCATCTCCCGTGATGA 9056614 Query 443838 GGGTTTGCATTGCGACTTCGC 443858 ||| ||||||||||||| || Sbjct 9056613 GGGGCTGCATTGCGACTTTGC 9056593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587981086320800