Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 100 4e-16
>seq17438
Length=17193109
Score = 100 bits (110), Expect = 4e-16
Identities = 261/393 (66%), Gaps = 15/393 (4%)
Strand=Plus/Plus
Query 182487 GGCCAGAAGTAGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCG 182546
|||||| | ||| || | ||| | || |||||||| ||||| |||||||| | ||
Sbjct 4177750 GGCCAGTTGGTGTGTATAAAATTGATGAGCAGACCCTTAATGTGGGAACCATCCTGGTCC 4177809
Query 182547 GCATCTGTCATAATCATAAGACGACCATAGCGAAG----TTCAGAAACATCTTGGTAGTC 182602
||| ||||| ||||| | ||||||||||| |||||| |||| | || ||
Sbjct 4177810 TGATCAGTCATGATCATCACCTTGCCATAGCGAAGCGTCTTCAGAT-CATC--GATACTC 4177866
Query 182603 T----TTTC--CTTGT--TGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTTT 182654
|||| ||| | || || |||| |||||| |||| ||||| ||| ||
Sbjct 4177867 AAATATTTCTTCTTATACTGCAGTCCAATGATCTTGCACAGATTATTGATCTCGGCATTC 4177926
Query 182655 GATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAAC 182714
|| || || | | || || || ||||| ||||||||| || || |||
Sbjct 4177927 TCGGTCAGTTGCTTGAAAGTGGCCTCGCGCACATTGAGTAGTTTACCGCGCAGCGGAAAC 4177986
Query 182715 ACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAA 182774
|| ||||| | | ||||||| ||| || || | || || | || ||| |||||
Sbjct 4177987 ACGCCGTAATAGTTGCGACCAATGACGCCCAGGCCGGAGACGGCCAAGGATTTTGCCGAG 4178046
Query 182775 TCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCG 182834
|||||||| |||| || || || || | | || | | || ||||||| ||| ||
Sbjct 4178047 TCACCCTCGGTGAGGATAAGCGTGCATTGTATGGAGTTTTTGGTGCCCGCCTCGTTGGCA 4178106
Query 182835 TCATCCAACTTGGGAATACCGGTAATTTTGGAC 182867
|| || | |||||||||||| |||||||||||
Sbjct 4178107 TCCTCTAGCTTGGGAATACCCTTAATTTTGGAC 4178139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627895089024000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |