Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq17438 86.0 5e-12 >seq17438 Length=17193109 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 118480 TGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCT 118539 ||||||| |||||| || | ||| || || || |||| || || ||||| | || || Sbjct 3984300 TGATTCAGATAGACGTGCGTATCGCCCATCGTGTGTACAAAGTCGCCAGGCTTCAGACCC 3984359 Query 118540 GTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCC 118599 |||| || |||||||| || || | || |||| || | || || |||||||| Sbjct 3984360 GTCACATGTGCAATCATATAGGTGAGCAGGGCGTAGGATGCGATGTTGAAGGGAACACCT 3984419 Query 118600 AGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCC 118646 ||||||||||| || | ||| |||| ||||| |||||||| || Sbjct 3984420 AGACCCATGTCGGCACTGCGCTGATACATCTGGCAGGAGAGCTCGCC 3984466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414388702956160