Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq17434 459 4e-124
seq17439 262 6e-65
>seq17434
Length=8399593
Score = 459 bits (508), Expect = 4e-124
Identities = 1227/1865 (66%), Gaps = 14/1865 (1%)
Strand=Plus/Plus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| |||| | | || || || || || ||||| ||||| || || || |||
Sbjct 1622251 GTGAACTGTATGGCATTTGCAGCCGGCTTCGTGCGAAGATAATACATTCCCGTCTTAAGA 1622310
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| |||| ||| ||||| || ||| |||||| ||| | || || || | |
Sbjct 1622311 CCGGCTTTCCACGAGTAAAAATGGATCGATGTCAGTTTGCCATAGTTGGGCTCAGCCACA 1622370
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
|| || || | ||||||||||||||| ||||| || || | ||| || |||||||| ||
Sbjct 1622371 TGTATGTTGAACGACTGACTTTGATCAATGAATGCCCCGCGATCGGCTGCCATTTTGATC 1622430
Query 75557 ATGGTCTTTTGAGGA-ATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA- 75614
| || ||| ||| |||||||| | || || | | | | | || | ||| |
Sbjct 1622431 GTTGT-TTTCACGGATATTTCCCACACGGTCTTATACAGATCCCTCACATTTTTTGGTAT 1622489
Query 75615 -GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATT 75672
|||| | | ||||| || ||||| | | | || ||| |||||| || |||||||
Sbjct 1622490 GGATTCGATGTTTTGTATTGATCCTCGACTGGCGATTATTTGATTCTTCATATCATCATC 1622549
Query 75673 CCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732
|||||| | ||| |||||| | | | | |||| |||| || | || || || ||
Sbjct 1622550 CCACAAGTCCAGCTCCGTTAAATCACGCAACAAATGATGATTCACCACCTGGAACTCACC 1622609
Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792
|||| || | ||| ||||| || || |||||| || || | |||||||| || ||
Sbjct 1622610 GGACAGCACGCGTCGGGTGTAGATGTTTGAGGTATACGGCTCAAACGATTCATTATTGCC 1622669
Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852
|| |||||||| || || || || ||||| || || || | | | ||| | | |||
Sbjct 1622670 CATTATTTGAGCCGTAGATGCGGTTGGCATGGGCGCAACAAGCAGAGAATTGCGCACACC 1622729
Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912
||| |||| || || | ||||| ||||| ||||| | |||| |
Sbjct 1622730 ATGCTCCTTGATCGACAGCTTAAGCGAGTTCCAGTCCCAGAGATCGGTTGGTGTCTTGCC 1622789
Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972
||| | |||||| |||| || || |||||| | ||| ||| ||||| || |
Sbjct 1622790 CCACATATCGTACTGTAAGATACCCTTGCTAACTGGACTTCCTGGATAGGTTTCATAGGG 1622849
Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032
|| ||||||| || | |||||| || || || | || || |||| || ||||| ||
Sbjct 1622850 TCCTTCCTTTTGGGCCAATTCGCAGCTGGCTTCCAGTGCGCCAAAATAGATGGTTTCAAA 1622909
Query 76033 AATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAA 76092
|| | | ||| | | | || || || ||| |||||| | | | ||||| ||
Sbjct 1622910 GATTTGTTGATTTAAAAGTGCGGCCTCTTCGCTCTCATAAGGATGACGCATTAGAATCAA 1622969
Query 76093 TGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC 76152
|||||| || | ||| || || ||||||||||| |||| ||| | |||||| | |
Sbjct 1622970 TGCATCCGCGAATCCTTGCACACCAATACCAATGGGTCGATGGCGAAAATTGGATTTCTT 1623029
Query 76153 AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTAC 76212
|| || |||| || || || || || || || |||||||| | ||| || |||
Sbjct 1623030 TGCCTCCGGAAGCGGATAGTAGTTGATGTCAATTATTTTATTCAAATTCTTGGTTACTGT 1623089
Query 76213 TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATT 76269
||| || || || ||||| || || | || || |||||||||| ||
Sbjct 1623090 TTTGGTGACTTCTTTCAGTTTCTTGAAGTCGTACGTTTTGTCGGACGTCACAAACATGTT 1623149
Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329
| || || ||||||| ||| || ||||| | |||| | | ||| | | ||
Sbjct 1623150 CAATGCAATCGATGCTAAATTGCACACGGCAATTTCATCGGGTGCCGAATACTCGACAAT 1623209
Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389
|| |||||||||||||| || ||||| || || | |||||| || |||||||| |||
Sbjct 1623210 TTCAGTGCATAGATTACTGCATTTGATGGTGCCCACATTTTGCTGATTGCTCTTGCGGTT 1623269
Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449
||||||||||| | || | | || || ||||| || | ||||| ||| || || |
Sbjct 1623270 GCATGAGTCCTTGAACAGCATGTAAGGTGTGCCAGTCTCCACCTGTGCTTCAATGATGGC 1623329
Query 76450 TTTCCAGACGACTCTAGCTTTTATTA-TAGATTTGTATCGCTTCTCTCTTTCATATTGTG 76508
||| | | |||||| |||| | |||| | | || |||| | || |||||
Sbjct 1623330 AAACCAAAGTGTTTGAGCTTTAATTACTCGATTCGCTTTGCC-CTCTTTCTCGTATTGAA 1623388
Query 76509 TATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGAC 76568
|| | ||||| || || ||||||||||| | | || ||||| | || || |
Sbjct 1623389 CGTACAGTTTCTCAAAATCGTCGCCCCAAACATCTTGGAGGCCGGGACACTTATGTGGGC 1623448
Query 76569 ACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATA 76628
|||||| ||||| || ||| | | || ||||||||||| ||||||||||||||||
Sbjct 1623449 ACATCAGGGACCAATCCTCATTGGCTTCGACGCGTTTCATAAACAGATCAGGTATCCATA 1623508
Query 76629 GAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTA 76688
||| ||| || || || | | | | || || || || || || || || | ||| |
Sbjct 1623509 AGGCATAAAACAGCTCACGTGCCCGATGCTCCTCTTTGCCCGTGTTTTTCTTCAAATCCA 1623568
Query 76689 GGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTT 76748
|| || | ||||| |||||||| || || | ||| || || | |||||||||| |
Sbjct 1623569 TAAATTCTAATATATCCGAATGCCACGGCTCCAAATAGATGGCAAATGCACCCGGTCGCT 1623628
Query 76749 TATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAA 76808
|| || |||||||| | ||| | || ||||| | || | || |||||| | |
Sbjct 1623629 TACCGCCACCCTGATCCACATAGCGTGCCACATTATTGAATACACGCAGCATTGGCACCA 1623688
Query 76809 TGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAA 76868
|| || || || ||||| || ||| |||| | | || ||||||||| | ||
Sbjct 1623689 GCCCATTCGAAGTGCCATTCGTGCCACAAATCGAGGTGCCTTTGGCACGAATACAATGAA 1623748
Query 76869 TAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCAT 76928
|| || || || || || ||| ||||| | || || ||| | | |
Sbjct 1623749 CGTTCAGCCCGATGCCACCAGCGGCTTTGGAGATCATGGCGCATTGTTCGACGGATTTGA 1623808
Query 76929 AGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGAT 76988
| |||||||| || ||| | |||| | | ||| ||||| |||||||| ||
Sbjct 1623809 AAATGCCCTCAATCGAATCGGAGACCATGGTTAAAAGGAAACACGACGACATTTGCGGAC 1623868
Query 76989 GAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTA 77048
|| || | || ||| | ||| || |||||||| ||||| | ||||||| || |
Sbjct 1623869 GATTTGTGGCAGCGGCAAAAAGTGTTGGCGATGCATGCGTGAAGTACCTTTCAGACAGCA 1623928
Query 77049 GATTGTATGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACG 77106
|||| || || || | | | || || |||| ||| | ||| || || | | ||| ||
Sbjct 1623929 GATTATAGGTCTCCACAGCAGCATCAATAT--CATCGCCATGTATCCCAATCGAGACGCG 1623986
Query 77107 CATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTT 77166
||||| ||| ||||| || || ||| | | || | |||||| |||| ||| || |||
Sbjct 1623987 CATCAGCATGTGCTGTGGACGCTCTGCTATTTTGTGATTTATCTTCAGCAAATACGATCG 1624046
Query 77167 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGA 77226
|| | || ||||| |||||||| || || |||||| | ||||| || || | ||
Sbjct 1624047 CTCGAGCGTCTTAAATCCAAAATAATTATAGCCAAAGTCACGATCGTAGATGATCGCAGA 1624106
Query 77227 ATTTA 77231
|||||
Sbjct 1624107 ATTTA 1624111
>seq17439
Length=18325388
Score = 262 bits (290), Expect = 6e-65
Identities = 558/826 (68%), Gaps = 13/826 (2%)
Strand=Plus/Plus
Query 46342 TGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 46401
|| ||||| || || ||||| |||||||| ||||| || |||||||| || |||||
Sbjct 9056302 TGATATTCGCCCACTTTCTTCTCAAAAAAATTGGTTTTACCGTCCAATGAAATCATTTCC 9056361
Query 46402 ATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 46461
|| ||| ||| ||||| | ||||| ||||| | || | || | ||
Sbjct 9056362 ATGAAAGTAAATGGATTCTTTGTGTTATATATTTTACCGACACCGAGCTCCACCAACAAG 9056421
Query 46462 CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTG 46521
| ||| || ||||| || ||||| ||||| |||||||||| || || || ||
Sbjct 9056422 CGATCGGCCACGAACTCAATATATTCGGACATCAGCGCACAATTCATGCCAATCAGATTT 9056481
Query 46522 ACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGAT 46581
|| || | ||| || || |||||||| || |||||||| ||||||||||| | ||||
Sbjct 9056482 ACAGGCAAAGCGTCAGTGAGAAACTCCTGCTCAATAGTCACAGCATCCGAGA----CGAT 9056537
Query 46582 GTTACTGTTTCCT-CAC---TTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | || | | | ||| | || | |||| || || | ||||| | | |||||
Sbjct 9056538 CTCAATGATGCGTTCACGGCTGGGACGCTGCACCAGGTGCTGGAACATCATAACCGCAAA 9056597
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| ||||| || || ||||| | || | ||||| || || || || || |||||
Sbjct 9056598 GTCGCAATGCAGCCCCTCATCACGGGAGATGAGCTCGTTTGAGAAAGTCAGACCGGGCAT 9056657
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
||| ||||||||||| ||||| || || | || ||| || |||||| ||||||||
Sbjct 9056658 TAGGCCACGCTTTTTAAGCCAGAAGATGGAGGCAAAACTGCCGCTAAAGAAGATGCCTTC 9056717
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATG-AATCCACCT 46814
|| || ||||| || | || | ||| || | ||||| | || ||| ||||||
Sbjct 9056718 GACGGCAGCGAAGGCAATAATGCGCTCCCCAAAGTTGGCAGCCTTGGATGAAATCCAAGA 9056777
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
| ||||| || ||||| ||||||| ||||||||||| |||||||| |||||| |
Sbjct 9056778 GAGCGCCCAGTCCGCCTTACGCTTTACAGCCGGCATTGTTTCAATAGCATTGAAGAGATA 9056837
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
| | || | |||| | ||| || || |||| | ||| ||||| ||||| ||
Sbjct 9056838 ATCGCGCTGATGAGGATCTCGGATATAAGTGTCGATTAGCACACTGTACATCTCTGAGTG 9056897
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
| || || || || |||||||| || || || || | || || |||||||| || ||
Sbjct 9056898 TACATTCTCCATGGCAATCTGAAAACCATAGAAGCAGCGCGCCTCTGTAATCTGCACTTC 9056957
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| ||| || ||| || |||||| || || || ||||| || || || || ||
Sbjct 9056958 CTGGCTAAAGCGCTCAACCAGATTCTCGTTAACAATGCCATCGGAGGCGGCGAAGAAAGC 9057017
Query 47055 CAATACATGTTTAATAAAATATTTTTCATCG-GTAGTCAGTTTATTCCAGTCATTGATAT 47113
||| |||||| ||| |||| |||| | | | || || |||||| | || |
Sbjct 9057018 CAACACATGTGAAATGAAATGACGCTCATTGTCTGTTAAGCGTA-CCCAGTCCGTCATGT 9057076
Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
| || |||| ||| || || || | ||||||||||| || || ||
Sbjct 9057077 CCTTGGATAGATCCACCTCCTCCACAGTCCAGAATGATGCTTCGGC 9057122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712778980300800
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