Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq17440 91.5 1e-13 >seq17440 Length=24565398 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 107558 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCTGATGCGT 107617 ||||||||||||||| | ||||| | | || || |||||||||| || || Sbjct 18410227 GTTGCCCAAATCGCCTAGATGACGAACGCCATCGGTTGGTGCGCCATGCTCCTTCTGGTG 18410286 Query 107618 AGGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTGCAC 107677 |||||||||||| || | |||| |||| || || | ||||||||||||| ||||| Sbjct 18410287 AGGATTAAAGTGCGGCCCCGACGACATGCATCCGTTTGTATTGTCGCCAAATTCATGCAC 18410346 Query 107678 GTGAAAACCGTGCAAGCCGCGCGGCAAA 107705 || || ||||||||||| ||| |||| Sbjct 18410347 ATGGAAGCCGTGCAAGCCTTGCGCCAAA 18410374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421721544029440