Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq17439 107 2e-18 >seq17439 Length=18325388 Score = 107 bits (118), Expect = 2e-18 Identities = 521/818 (64%), Gaps = 18/818 (2%) Strand=Plus/Plus Query 23221 TGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTC 23279 |||||||| || || |||| || |||||||| || ||||| || ||||| || |||| Sbjct 9056302 TGATATTCGCCCACTT-TCTTCTCAAAAAAATTGGTTTTACCGTCCAATGAAATCATTTC 9056360 Query 23280 CATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAAT----TCCTTTA 23335 ||| ||| ||||||||| || ||||||| ||||| || | ||| | Sbjct 9056361 CATGAAAGTAAATGGATTCTTTGTGTTATATAT---TTTACC-GACACCGAGCTCCACCA 9056416 Query 23336 AAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTA 23395 | | | ||| || || || |||||||||| |||||| || | || || || || | Sbjct 9056417 ACAAGCGATCGGCCACGAACTCAATATATTCGGACATCAGCGCACAATTCATGCCAATCA 9056476 Query 23396 GTTTTACTGGAATCGCATCATATAAGAATAGTTTT--TCAATGGAAACAGCATCTTTAAT 23453 | ||||| || | || ||| | |||| | | | ||||| | |||||||| | Sbjct 9056477 GATTTACAGGCAAAGCGTCAG-TGAGAA-ACTCCTGCTCAATAGTCACAGCATCCGAGAC 9056534 Query 23454 TATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACA--ATAAACAT 23511 || | || || ||| || || | | | | || |||| |||| | Sbjct 9056535 GATCTCAATGATGCGTTCACGGCTGGGACGCTGCACCAGGTGCTGGAACATCATAACC-- 9056592 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| || ||||| || || ||||| | || | || || || || || | || Sbjct 9056593 GCAAAGTCGCAATGCAGCCCCTCATCACGGGAGATGAGCTCGTTTGAGAAAGTCAGACCG 9056652 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||||| || || ||||||| ||| || || | ||||| ||| |||||| || Sbjct 9056653 GGCATTAGGCCACGCTTTTTAAGCCAGAAGATGGAGGCAAAACTGCCGCTAAAGAAGATG 9056712 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || || || || ||||| | || || ||||| | ||| | |||||| Sbjct 9056713 CCTTCGACGGCAGCGAAGGCAATAATGCGCTCCCCAAAGTTGGCAGCCTTGGATGAAATC 9056772 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751 || | ||| | ||||| |||||| | ||||||||||| || || ||| Sbjct 9056773 CAAGAGAGCGCCCAGTCCGCCTTACGCTTTACAGCCGGCATTGTTTCAATAGCATTGAAG 9056832 Query 23752 AGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCA 23811 ||| || | | | |||| ||||| || || ||||| | ||| ||||| || Sbjct 9056833 AGATAATCGCGCTGATGAGGATCTCGGATATAAGTGTCGATTAGCACACTGTACATCTCT 9056892 Query 23812 GAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGA 23871 || || | ||| || || ||||||||||| ||||| || || | || || | | || Sbjct 9056893 GAGTGTACATTCTCCATGGCAATCTGAAAACCATAGAAGCAGCGCGCCTCTGTAATCTGC 9056952 Query 23872 ACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAG 23931 || || | ||| | | | | | ||| ||||||||||| ||||| || || ||| Sbjct 9056953 ACTTCCTGGCTAAAGCGCTCAACCAGATTCTCGTTAACAATGCCATCGGAGGCGGCGAAG 9057012 Query 23932 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTA 23991 ||||| | |||| | || ||||| | |||| || ||| | ||| || | Sbjct 9057013 AAAGCCAACACATGTGAAATGAAATGACGCTCATTGTCTGTTAAGCGTACCCAGTCCGTC 9057072 Query 23992 ATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || || || |||| ||| || || || || ||||| || Sbjct 9057073 ATGTCCTTGGATAGATCCACCTCCTCCACAGTCCAGAA 9057110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521374315616000