Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4764 93.3 4e-14
>seq4764
Length=1750656
Score = 93.3 bits (102), Expect = 4e-14
Identities = 177/258 (69%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCCT 118995
|||||||| || ||||| || || | || ||||||||||| | | ||||||| ||
Sbjct 341837 TTCATGTACCGAATCTTACCGAAGATGGCCCGCTCCTTCCAGCCCATATCGTGGACGCCG 341778
Query 118996 GCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTA 119055
| | | ||| | || ||||| || ||||||||||| ||||| | ||||||
Sbjct 341777 CCGATGGACCACATGCAACCCACATAGCCGTTGGGATCGCGCCCGTCCAGGCTGTACTTG 341718
Query 119056 TCGTTTAAGTAGATACAG-ACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAt 119114
||||| | ||| | || | | ||| ||||| || ||||| || || ||
Sbjct 341717 TCGTTCAGCAGGATGGCGTACTCG-AGCGCCTGCTCCGGCGTGGGGCTCCACTCGAGGAT 341659
Query 119115 ttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAG 119174
|| || ||||||||||| || || | || |||||||| |||||| || || ||| ||
Sbjct 341658 CTTCTTGGCCCAGTACATGCGCAAGAAACCATGCATTTTGCCCTCGCGAACCAGCTGCAG 341599
Query 119175 TTGTGCGGTGTTCCATAG 119192
||| || | |||||| ||
Sbjct 341598 TTGCGCCGCGTTCCACAG 341581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511381535232120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |