Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq4678 84.2 2e-11
>seq4678
Length=1229792
Score = 84.2 bits (92), Expect = 2e-11
Identities = 178/266 (67%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563
||| ||||| || || || | ||| ||||| || ||||| | |||||||| || |||||
Sbjct 1146677 AATGTAAGTGTCGATCAGCACACTGTACATCTCCGAATGCACGTTCTCCATGGCGATCTG 1146736
Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAA 16623
|| ||||||||||| | || |||| || ||||| || | ||| | || | |
Sbjct 1146737 GAAGCCATAAAAGCAGCGGGCCTCGGTGATCTGTACCTCCTGGCTAAAGCGCTCCACCAG 1146796
Query 16624 GTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtt 16683
|| ||||| || || |||||| || ||||| || || || | || || || |
Sbjct 1146797 ATTCTCGTTGACAATACCATCGGAGGCGGCAAAGAAGGCCAGCACATGGGAGATGAAGTG 1146856
Query 16684 tttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTC 16743
||||| ||| ||| |||||| | | ||| || || || || ||||||||
Sbjct 1146857 GCGTTCGTCATCCTTAAGGCGATGCCAGTCGGTGAGATCCTTGGACAAGTCCACCTCTTC 1146916
Query 16744 TACAGTCCAAAAAGAAGCAACAGCCT 16769
|| ||||| || || || | ||||
Sbjct 1146917 CACGGTCCAGAAGGAGGCCTCGGCCT 1146942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462482277822600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |