Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_002666.1 Length=35538 Score E Sequences producing significant alignments: (Bits) Value seq4953 122 2e-23 >seq4953 Length=802672 Score = 122 bits (134), Expect = 2e-23 Identities = 206/293 (70%), Gaps = 8/293 (3%) Strand=Plus/Minus Query 6621 ATGATTAATAATGTTGTA-TTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGACATAC 6679 |||||||||| || || ||| | || |||||||| || ||| ||| || | |||| Sbjct 673316 ATGATTAATACAGTAGTTCTTACT-GGACGCTTAACACGAGACGTTGA--TTTGCGATAC 673260 Query 6680 ACCACAGAA---CCAAGCAGTAGGTACATTTGGATTAGCTGTAAATCGCCAGTTTAAAAA 6736 ||| || || | ||||| ||||| ||| ||||||| | || | || | || Sbjct 673259 ACC-CAAAATGGCGCGGCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAA 673201 Query 6737 TGCGAATGGCGAACGTGAGGCTGATTTCATTAACTGCGTTATTTGGCGACAACAAGCCGA 6796 | ||||||| || || || ||||| ||| | ||||| |||||||||||| || ||| || Sbjct 673200 TTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGA 673141 Query 6797 AAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATTGGAATAACTGGACGGATTCAAAC 6856 ||| || || || || | | || || | | ||||||| || |||||||| || Sbjct 673140 AAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGAC 673081 Query 6857 AAGGAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTG 6909 | || || |||||| | || || ||| |||||||||||||||||| |||| Sbjct 673080 CCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTG 673028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113593064791000