Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq4953 131 4e-26 >seq4953 Length=802672 Score = 131 bits (144), Expect = 4e-26 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 7105 GCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCTAATGGAGAAAGA 7164 ||||||| |||||||| || || ||| | || || | ||| | ||||| || | Sbjct 673244 GCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGG 673185 Query 7165 GAAGCTGACTTTATCAATTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 7224 ||||||||||| |||| |||||||||||| | |||||||| |||||||| ||||| | Sbjct 673184 GAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTC 673125 Query 7225 ACTCATAAAGGTCAATTAATCGGAGTTACTGGTAGTATTCAAACTCGAAACTACGAGAAC 7284 ||||| ||| | | | ||| | ||| | ||||| || ||||| ||||||||| Sbjct 673124 GTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAAC 673065 Query 7285 CAACAAGGTCAACGAGTTTATGTAACAGAAGT 7316 | || || |||||||||||||| || ||||| Sbjct 673064 AAGCAGGGCCAACGAGTTTATGTTACCGAAGT 673033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133739034817032