Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq4953 87.8 2e-13 >seq4953 Length=802672 Score = 87.8 bits (96), Expect = 2e-13 Identities = 130/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 14515 ATATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCA 14574 |||||||| | | || || || ||||||||||| || || || || | ||| ||||| | Sbjct 400531 ATATTATGAAACAAGGTACTGTTAAATGGTTTAATGCTGACAAGGGTTATGGTTTTATTA 400590 Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCA 14634 || | || || || ||| | |||| || | ||||| ||| | ||||| |||| Sbjct 400591 CTACTGATGATGGT---GATGTATTCGTACATTATTCAGCTATCAACAAGGATGGTTTCA 400647 Query 14635 AATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTC 14694 | | ||||| ||||| |||| ||| || || ||||||||||| | ||||||| | Sbjct 400648 AGACCCTTGACGAAGGCGAAAAGGTTACTTTGGACGTTGAAGAAGGAGACCGTGGTCCCC 400707 Query 14695 AAGC 14698 |||| Sbjct 400708 AAGC 400711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48451519734186