Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4988 109 1e-18
>seq4988
Length=2040242
Score = 109 bits (120), Expect = 1e-18
Identities = 258/381 (68%), Gaps = 18/381 (5%)
Strand=Plus/Minus
Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC-GCTGGCCCGA 254069
|||| || |||| || || || || || |||||| ||||| ||||| |||| |||||
Sbjct 268142 TGCTGCTCTACGGACCACCGGGTACGGGAAAGACGAGCACCATTCTGGCAGCTG-CCCGA 268084
Query 254070 ACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAA 254129
| || || || | ||| | || ||| | || ||||||||||| || || ||
Sbjct 268083 CAGATTTTCGGTGATATGTACAAG---GACCGCATACTGGAGCTGAACGCGTCCGATGAG 268027
Query 254130 CGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCG------ATT 254183
|| || | | || || ||| ||||||||||| ||||| || ||||| | |
Sbjct 268026 CGTGGCATCAATGTGGTGCGCACCAAGATCAAGAACTTCTCACAGCTGTCGGCCAGCAGT 267967
Query 254184 TCGTCGTTCCAACC--CGGC--TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGA 254239
| ||| | || |||| |||||||| ||||| || | |||||||||||||||||
Sbjct 267966 GTG-CGTCCAGACGGACGGCCCTGTCCGCCCTTCAAAATCATCATCCTGGACGAGGCGGA 267908
Query 254240 CACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCA-CTCCGTTG 254298
| | ||||| | ||| || || || || || || || ||||| | | | ||| |
Sbjct 267907 CTCGATGACACATGCCGCCCAATCGGCTCTGCGTCGCACCATGGAAAAGGAGAGCCGCAG 267848
Query 254299 TGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTC 254358
||||| || || || | ||||||||||| ||| ||||| | || | | || |
Sbjct 267847 -CACGCGCTTCTGTTTGATTTGCAACTACGTTTCGCGCATCATTGTGCCCATCACGTCGC 267789
Query 254359 GGTGCGCCAAGTTTCGATTCA 254379
| ||| |||||||||| ||||
Sbjct 267788 GCTGCTCCAAGTTTCGGTTCA 267768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073695672013888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |