Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_002703.1
Length=38347
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 116 9e-22
>seq4953
Length=802672
Score = 116 bits (128), Expect = 9e-22
Identities = 205/293 (70%), Gaps = 8/293 (3%)
Strand=Plus/Minus
Query 6519 ATGATTAATAATGTTGTA-TTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGACATAC 6577
|||||||||| || || ||| | || |||||||| || ||| ||| || | ||||
Sbjct 673316 ATGATTAATACAGTAGTTCTTACT-GGACGCTTAACACGAGACGTTGA--TTTGCGATAC 673260
Query 6578 ACCACAGAA---CCAAGCAGTAGGTACATTTGGATTAGCTGTAAATCGCCAGTTTAAAAA 6634
||| || || | ||||| ||||| ||| ||||||| | || | || | ||
Sbjct 673259 ACC-CAAAATGGCGCGGCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAA 673201
Query 6635 TGCGAATGGCGAACGTGAGGCTGATTTAATTAACTGCGTTATTTGGCGACAACAAGCCGA 6694
| ||||||| || || || ||||| || | ||||| |||||||||||| || ||| ||
Sbjct 673200 TTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGA 673141
Query 6695 AAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATTGGAATAACTGGACGGATTCAAAC 6754
||| || || || || | | || || | | ||||||| || |||||||| ||
Sbjct 673140 AAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGAC 673081
Query 6755 AAGGAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTG 6807
| || || |||||| | || || ||| |||||||||||||||||| ||||
Sbjct 673080 CCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTG 673028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122581316030378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |