Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq4644 134 1e-26
seq4810 129 5e-25
seq4863 127 2e-24
>seq4644
Length=1132839
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| ||||| || ||||||||| |||||||||||| || ||| |||| |||
Sbjct 752516 ACCAAATGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCC 752457
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| || || ||||| | ||||||||||||
Sbjct 752456 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 752397
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| ||||||||||| ||| || |||||
Sbjct 752396 ATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTT 752337
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||||||||| |||||
Sbjct 752336 CCGGTCAGGGTCTTCACAAAGATCTGCAT 752308
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| |||||||||||| || ||| |||| |||
Sbjct 751831 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCC 751772
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| || || ||||| | ||||||||||||
Sbjct 751771 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 751712
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||||| | || ||||||| ||| || |||||
Sbjct 751711 ATCTTGGCCTTCACATTCTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTTT 751652
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| || ||||||||||| |||||
Sbjct 751651 CCAGTCAAGGTTTTCACAAAGATCTGCAT 751623
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| |||||||||||| || ||| |||| |||
Sbjct 752288 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCC 752229
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| ||||| ||||| || || ||||| | ||||||||||||
Sbjct 752228 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 752169
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| ||||||||||| ||| || |||||
Sbjct 752168 ATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTT 752109
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||||||||| ||||| |||||
Sbjct 752108 CCGGTAAGAGTCTTCACGAAGATCTGCAT 752080
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| || ||| |||| |||
Sbjct 752744 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCC 752685
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| || || || || | |||||||||||
Sbjct 752684 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGTATTCCCTCCTTGTCTTGG 752625
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| |||||| |||| || || |||||
Sbjct 752624 ATTTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTT 752565
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||||||||| |||||
Sbjct 752564 CCAGTCAGGGTCTTCACAAAGATCTGCAT 752536
Score = 100 bits (110), Expect = 2e-16
Identities = 149/210 (71%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| ||||||||||| || ||| | || |||
Sbjct 752060 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCCTCC 752001
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| || || ||||| | ||||||||||||
Sbjct 752000 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 751941
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| |||||| |||| || || |||||
Sbjct 751940 ATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTT 751881
Query 45308 CC-CGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||||||||||||||| |||||
Sbjct 751880 CCGAGTAAGAGTCTTCACAAAGATCTGCAT 751851
>seq4810
Length=1195048
Score = 129 bits (142), Expect = 5e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| |||||||| ||| ||| ||| |||| |||
Sbjct 316512 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCC 316453
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || |||||||| || |||| ||||| ||||| || || | ||||||||||||
Sbjct 316452 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 316393
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| ||| ||||| | ||| || ||||||
Sbjct 316392 ATCTTGGCCTTGACGTTCTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTGATAGTCTTG 316333
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
|| |||| |||||| || ||||||||||||||| ||
Sbjct 316332 CCGGTCAAAGTCTTGACGAAGATTTGCATGTTGGCT 316297
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| |||| ||| ||||||||| |||||||| ||| || ||| |||| |||
Sbjct 316968 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTCCTCC 316909
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || |||||||| || |||| ||||| ||||| || || | ||||||||||||
Sbjct 316908 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 316849
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| ||| ||||| | ||| || ||||||
Sbjct 316848 ATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTTG 316789
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| |||||| || ||||| ||||||
Sbjct 316788 CCAGTCAAAGTCTTGACGAAGATCTGCATG 316759
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| ||||||||||| || |||| | || |||
Sbjct 316740 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCCTCC 316681
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || |||||||| || |||| ||||| ||||| || || | ||||||||||||
Sbjct 316680 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 316621
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | | || ||| ||||| | ||| || ||||||
Sbjct 316620 ATCTTGGCCTTGACGTTCTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTTG 316561
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| |||||| || ||||| ||||||
Sbjct 316560 CCGGTCAAAGTCTTGACGAAGATCTGCATG 316531
>seq4863
Length=1240122
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||||||||| |||||||||||| ||| ||| | || |||
Sbjct 1064087 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCC 1064028
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||| || || || || | ||||||||||||
Sbjct 1064027 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 1063968
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||||| | ||||||||||| ||| || ||||||
Sbjct 1063967 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTG 1063908
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| || || || ||||| ||||| |||||| ||
Sbjct 1063907 CCGGTGAGGGTTTTCACGAAGATCTGCATGGTG 1063875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395050446192961
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