Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq4761 205 8e-48
>seq4761
Length=1439414
Score = 205 bits (226), Expect = 8e-48
Identities = 387/566 (68%), Gaps = 14/566 (2%)
Strand=Plus/Plus
Query 20779 AAACGGCCATCTCCATCTCTATGTGGGGATGGGGGTCGTAGCCCTCGAGACTCAGA-TCC 20837
|||||||||| ||||||| || | || | ||| | ||| | | | |||| | |||
Sbjct 1350081 AAACGGCCATTTCCATCTGGATTTTTGGGTAGGGATTGTAATCGACTAT-CTCAAAGTCC 1350139
Query 20838 GCGCGCGTAAAGTCCTCCAGACGCGCCACCTTTCTCAAAATCTTCAGCCGCGGAAACGGA 20897
| | ||||||||| | | |||||| | | ||| |||| |||||||||
Sbjct 1350140 TCAAACCGAAAGTCCTCAATGTCCTGCACCTTGCGCTTGATCACCAGCTTGGGAAACGGA 1350199
Query 20898 CGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCG 20957
||||| || | | ||||||| | ||| ||||| || || || ||| || || |||
Sbjct 1350200 CGCGGAGTGCGCTGCAGCTGCTCCTTCAGCGGATCCACATGATTTAGGTAGACATGAGCG 1350259
Query 20958 TCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATAC 21017
|| |||| ||| || |||||||| || || |||| || || || || || |||| |
Sbjct 1350260 TCGCCCATGGTATGAACAAAGTCACCAGGCTTCAGACCTGTCACATGGGCTATCATGTGG 1350319
Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077
|| || |||||||| ||||||||| || || || || || |||||||| ||| ||||
Sbjct 1350320 GTAAGCAGGGCGTAAGAGGCGATGTTGAATGGCACGCCCAGACCCATGTCAGCGCTCCTC 1350379
Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC------ACGTAAAACTGACACAAAACG 21131
||||||||||| ||||||| ||| || || || ||| | ||||| || |
Sbjct 1350380 TGGTACAGCTGACAGGACAACTCGCCACGGTCCTGGGATACGAAGAACTGCGCCAGGCAG 1350439
Query 21132 TGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATG 21191
||||| || || || |||||| | | ||| ||| ||||| ||| |||| | ||||
Sbjct 1350440 TGACATGGCGGCAGCGCCATCTTTGGTATATCCAGGGGATTCCATGCGGACATGATGATG 1350499
Query 21192 CGCCGATCGTGGGGCCGCCTGTTAATTA---GATCCACCACGTAACGCAGCTGGTCCACC 21248
|||| || | | | |||| ||| || | ||| | |||||||||||| |
Sbjct 1350500 CGCC---TGTCCGACGGATTGTTCTTTATCGTCTCGATCACCTGACGCAGCTGGTCGATG 1350556
Query 21249 CCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGG 21308
||||| || ||||| | ||||| | ||||| |||||||| || | |||||||
Sbjct 1350557 CCCTGGCCGCTGTAGTCGTCGTCGCAGGTGCGATACTCTGCCCCAAAGTGCCGCCACTGG 1350616
Query 21309 AACCCGTACACCGGCCCCAGATCGCC 21334
|| ||||| ||||| |||| ||| ||
Sbjct 1350617 AAGCCGTATACCGGGCCCAAATCTCC 1350642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427749197293680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |