Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq4953 100 7e-17 >seq4953 Length=802672 Score = 100 bits (110), Expect = 7e-17 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 8356 GCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCTAATGGAGAAAGA 8415 ||||||| |||||||| || || ||| | || || | || | ||||| || | Sbjct 673244 GCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGG 673185 Query 8416 GAAGCTGACTTTATCAGTTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 8475 ||||||||||| ||| |||||||||||| | |||||||| |||||||| ||||| | Sbjct 673184 GAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTC 673125 Query 8476 ACTCATAAAGGTCAATTAATTGGAGTTATTGGGAATATCCAGACTCGAAACTATGAGAAC 8535 ||||| ||| | | ||||| | || || ||||| ||||| || |||||| Sbjct 673124 GTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAAC 673065 Query 8536 CAACAAGGGCAGCGTGTTTATATTACGGAGGTTGT 8570 | || || || || |||||| |||| || || || Sbjct 673064 AAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGT 673030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117624818639920