Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_004305.1 Length=42259 Score E Sequences producing significant alignments: (Bits) Value seq5094 86.0 2e-12 >seq5094 Length=366253 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2594 GCGAGTGTAGTTTAGTGGTAAAACGATAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCC 2653 ||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||| Sbjct 1530 GCGGGTGTAGTTTAGTGGTAAAACCGTAGCCTTCCAAGCTACTGTCGCGAGTCCGATTCT 1589 Query 2654 CGTCACTCACTT 2665 |||||| | ||| Sbjct 1590 CGTCACCCGCTT 1601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135098951789882