Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_004813.1
Length=57930
Score E
Sequences producing significant alignments: (Bits) Value
seq1486 167 9e-37
seq4198 161 4e-35
seq4902 147 8e-31
seq4797 125 3e-24
seq3455 113 2e-20
>seq1486
Length=18552
Score = 167 bits (184), Expect = 9e-37
Identities = 293/423 (69%), Gaps = 18/423 (4%)
Strand=Plus/Plus
Query 53059 GCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTT 53118
||| ||||| | ||||||||||| || ||| ||||||||||| || ||||| || ||
Sbjct 348 GCTCTGGGTTTCGGATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTATGTAGCCTT 407
Query 53119 CATCATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATC----GTCCATGG 53174
||||||||||||||||||| | ||||||||| ||||| |||||||| | ||||
Sbjct 408 CATCATTGATGTGTTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACGGCCCATAC 467
Query 53175 AGACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCC--CGTCGACCGTCCGG 53232
||| |||||||||||||| || |||||||| | || ||| | | ||| ||
Sbjct 468 CGAC----TTCGTGCTGGATGCCCTTGAGCAGGC--TCTGTGCCAGAGGCAACCTGAGGG 521
Query 53233 CACGGT---CCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCG 53289
| || |||||| ||| || | ||||||||| || | |||||| || |
Sbjct 522 AAAAGTGACCCATCATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTACACGCAAAG 581
Query 53290 GCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGC 53349
|| ||||| || | | || ||| ||||| || || || ||||| || ||
Sbjct 582 ACTGGCTGAAGCGGGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTATGATAATGC 641
Query 53350 GATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTG 53406
| ||||||| ||| || || || |||||| | || | || | || || | ||
Sbjct 642 CCTCGCGGAGACCATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAGGGGCCATG 701
Query 53407 GAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG 53466
||||||| | | || || |||||||||||||| | ||||| ||||||| ||||||||
Sbjct 702 GAAAAACAGGGAAGCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTCAACAATCG 761
Query 53467 ACG 53469
||
Sbjct 762 GCG 764
Score = 167 bits (184), Expect = 9e-37
Identities = 298/431 (69%), Gaps = 18/431 (4%)
Strand=Plus/Minus
Query 53051 CCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTAT 53110
||| || ||| ||||| | ||||||||||| || ||| ||||||||||| || |||
Sbjct 18214 CCTAACAGGCTCTGGGTTTCGGATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTAT 18155
Query 53111 GTGGCGTTCATCATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATC---- 53166
|| || ||||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct 18154 GTAGCCTTCATCATTGATGTGTTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACG 18095
Query 53167 GTCCATGGAGACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCC--CGTCGA 53224
| |||| ||| |||||||||||||| || |||||||| | || ||| | | |
Sbjct 18094 GCCCATACCGAC----TTCGTGCTGGATGCCCTTGAGCAGGC--TCTGTGCCAGAGGCAA 18041
Query 53225 CCGTCCGGCACGGT---CCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTAC 53281
|| || | || |||||| ||| || | ||||||||| || | ||||
Sbjct 18040 CCTGAGGGAAAAGTGACCCATCATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTAC 17981
Query 53282 ACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTAT 53341
|| || | || ||||| || | | || ||| ||||| || || || |||
Sbjct 17980 ACGCAAAGACTGGCTGAAGCGGGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTAT 17921
Query 53342 GACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAG 53401
|| || || | ||||||| ||| || || || |||||| | || | || | || ||
Sbjct 17920 GATAATGCCCTCGCGGAGACCATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAG 17861
Query 53402 AG---CTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTAT 53458
| ||||||||| | | || || |||||||||||||| | ||||| |||||||
Sbjct 17860 GGGCCATGGAAAAACAGGGAAGCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTC 17801
Query 53459 AACAATCGACG 53469
|||||||| ||
Sbjct 17800 AACAATCGGCG 17790
Score = 152 bits (168), Expect = 2e-32
Identities = 374/555 (67%), Gaps = 28/555 (5%)
Strand=Plus/Minus
Query 50223 TGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATC 50282
||||| | |||||||| | || ||| ||||||||||| |||||||| || ||||||
Sbjct 18202 TGGGTTTCGGATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTATGTAGCCTTCATC 18143
Query 50283 ATTGATGTGTTCGCCGGATACATCGTGGGATGGCAGGTCTCATCA----TCCATGGAAAC 50338
||||||||||| ||| | ||| ||||| |||| ||||||||| |||| | |
Sbjct 18142 ATTGATGTGTTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACGGCCCAT---ACC 18086
Query 50339 AACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGC--CGTCCGGCACA 50396
|| |||||||||||||| || |||||||| |||| || ||| | | || | |
Sbjct 18085 GAC-TTCGTGCTGGATGCCCTTGAGCAGGCTCTGTG---CCAGAGGCAACCTGAGGGAAA 18030
Query 50397 ----ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCT 50452
| |||||| ||| || | ||||||||| || | ||||||||| | ||
Sbjct 18029 AGTGACCCATCATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTACACGCAAAGACT 17970
Query 50453 TAAGGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGAT 50512
||||| || | | || ||| || || ||| || || ||||| || || |
Sbjct 17969 GGCTGAAGCGGGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTATGATAATGCCCT 17910
Query 50513 GGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 50569
|| |||| ||| || || || |||||| | || | || | || || | |||||
Sbjct 17909 CGCGGAGACCATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 17850
Query 50570 AAACCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG 50629
|||| || || || |||||||||||||| | ||||| ||||||| |||||||| ||
Sbjct 17849 AAACAGGGAAGCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTCAACAATCGGCG 17790
Query 50630 ATTGCTGGAAAGGCTGGGCCATATTCCTCCGGCAGAAGCAGA-AAAAGCTTATTATGCTT 50688
| ||| | || | || || || |||||||| || |||| |||||||
Sbjct 17789 GCTCCTGTCCTCCATTGGAAACATCCCCCCAGCAGAAGCTGAGGCTCGCTT-TTATGCT- 17732
Query 50689 CCATCGGAAAT--AATGATCTGGCAGCCTGAGTTCACAGATAAAATACTCTCCAGGAAAC 50746
|| ||||| ||| | || || | |||||| | | ||||| |||||| ||||
Sbjct 17731 -CAGAAGAAATCACATGCATTAGCTGCGT-AGTTCAGATAAAAAAT-GTCTCCACAAAAC 17675
Query 50747 CCGGGGCGGTTCAGG 50761
||||||| ||||||
Sbjct 17674 CCGGGGCAATTCAGG 17660
Score = 149 bits (164), Expect = 2e-31
Identities = 372/553 (67%), Gaps = 28/553 (5%)
Strand=Plus/Plus
Query 50223 TGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATC 50282
||||| | |||||||| | || ||| ||||||||||| |||||||| || ||||||
Sbjct 352 TGGGTTTCGGATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTATGTAGCCTTCATC 411
Query 50283 ATTGATGTGTTCGCCGGATACATCGTGGGATGGCAGGTCTCATCA----TCCATGGAAAC 50338
||||||||||| ||| | ||| ||||| |||| ||||||||| |||| | |
Sbjct 412 ATTGATGTGTTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACGGCCCAT---ACC 468
Query 50339 AACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGC--CGTCCGGCACA 50396
|| |||||||||||||| || |||||||| |||| || ||| | | || | |
Sbjct 469 GAC-TTCGTGCTGGATGCCCTTGAGCAGGCTCTGTG---CCAGAGGCAACCTGAGGGAAA 524
Query 50397 ----ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCT 50452
| |||||| ||| || | ||||||||| || | ||||||||| | ||
Sbjct 525 AGTGACCCATCATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTACACGCAAAGACT 584
Query 50453 TAAGGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGAT 50512
||||| || | | || ||| || || ||| || || ||||| || || |
Sbjct 585 GGCTGAAGCGGGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTATGATAATGCCCT 644
Query 50513 GGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 50569
|| |||| ||| || || || |||||| | || | || | || || | |||||
Sbjct 645 CGCGGAGACCATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 704
Query 50570 AAACCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG 50629
|||| || || || |||||||||||||| | ||||| ||||||| |||||||| ||
Sbjct 705 AAACAGGGAAGCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTCAACAATCGGCG 764
Query 50630 ATTGCTGGAAAGGCTGGGCCATATTCCTCCGGCAGAAGCAGA-AAAAGCTTATTATGCTT 50688
| ||| | || | || || || |||||||| || |||| |||||||
Sbjct 765 GCTCCTGTCCTCCATTGGAAACATCCCCCCAGCAGAAGCTGAGGCTCGCTT-TTATGCT- 822
Query 50689 CCATCGGAAAT--AATGATCTGGCAGCCTGAGTTCACAGATAAAATACTCTCCAGGAAAC 50746
|| ||||| ||| | || || | |||||| | | ||||| |||||| ||||
Sbjct 823 -CAGAAGAAATCACATGCATTAGCTGCGT-AGTTCAGATAAAAAAT-GTCTCCACAAAAC 879
Query 50747 CCGGGGCGGTTCA 50759
||||||| ||||
Sbjct 880 CCGGGGCAATTCA 892
>seq4198
Length=487851
Score = 161 bits (178), Expect = 4e-35
Identities = 284/410 (69%), Gaps = 18/410 (4%)
Strand=Plus/Minus
Query 53072 GATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTG 53131
||||||||||| || ||| ||||||||||| || ||||| || |||||||||||||||
Sbjct 350873 GATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTATGTAGCCTTCATCATTGATGTG 350814
Query 53132 TTTGCCGGATACATTGTGGGGTGGCGGGTCTCATC----GTCCATGGAGACGACATTCGT 53187
|||||| | ||||||||| ||||| |||||||| | |||| ||| |||||
Sbjct 350813 TTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACGGCCCATACCGAC----TTCGT 350758
Query 53188 GCTGGATGCACTGGAGCAGGCGTTATGGGCC--CGTCGACCGTCCGGCACGGT---CCAT 53242
||||||||| || |||||||| | || ||| | | ||| || | || ||||
Sbjct 350757 GCTGGATGCCCTTGAGCAGGC--TCTGTGCCAGAGGCAACCTGAGGGAAAAGTGACCCAT 350700
Query 53243 CACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCC 53302
|| ||| || | ||||||||| || | |||||| || | || |||||
Sbjct 350699 CATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTACACGCAAAGACTGGCTGAAGCG 350640
Query 53303 GGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGC 53362
|| | | || ||| ||||| || || || ||||| || || | ||||||| |
Sbjct 350639 GGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTATGATAATGCCCTCGCGGAGACC 350580
Query 53363 ATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAAAAACCGTGCA 53419
|| || || || |||||| | || | || | || || | ||||||||| | | |
Sbjct 350579 ATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAAAAACAGGGAA 350520
Query 53420 GAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACG 53469
| || |||||||||||||| | ||||| ||||||| |||||||| ||
Sbjct 350519 GCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTCAACAATCGGCG 350470
Score = 145 bits (160), Expect = 3e-30
Identities = 366/544 (67%), Gaps = 28/544 (5%)
Strand=Plus/Minus
Query 50232 GATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATCATTGATGTG 50291
|||||||| | || ||| ||||||||||| |||||||| || |||||||||||||||
Sbjct 350873 GATTTTACTTATGTTTCCACTTGGCAGGGCTTTGTTTATGTAGCCTTCATCATTGATGTG 350814
Query 50292 TTCGCCGGATACATCGTGGGATGGCAGGTCTCATCA----TCCATGGAAACAACATTCGT 50347
|| ||| | ||| ||||| |||| ||||||||| |||| | | || |||||
Sbjct 350813 TTTGCCCGGGTCATTGTGGGCTGGCGTGTCTCATCAACGGCCCAT---ACCGAC-TTCGT 350758
Query 50348 GCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGC--CGTCCGGCACA----ATCCA 50401
||||||||| || |||||||| |||| || ||| | | || | | | |||
Sbjct 350757 GCTGGATGCCCTTGAGCAGGCTCTGTG---CCAGAGGCAACCTGAGGGAAAAGTGACCCA 350701
Query 50402 TCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCTTAAGGAAGC 50461
||| ||| || | ||||||||| || | ||||||||| | || |||||
Sbjct 350700 TCATTCAGATCGCGGCTGTCAGTATGTGTCCATTCGCTACACGCAAAGACTGGCTGAAGC 350641
Query 50462 CGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGATGGCTGAGAG 50521
|| | | || ||| || || ||| || || ||||| || || | || ||||
Sbjct 350640 GGGGCTCGTTGCCTCAGTCGGAAGCGTTGGAGATTCCTATGATAATGCCCTCGCGGAGAC 350581
Query 50522 CATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAAAAACCGGAC 50578
||| || || || |||||| | || | || | || || | ||||||||| ||
Sbjct 350580 CATTAACGGGCTCTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAAAAACAGGGA 350521
Query 50579 AGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGA 50638
|| || |||||||||||||| | ||||| ||||||| |||||||| || | |||
Sbjct 350520 AGCGGTTGAACTGGCCACACTTAAATGGGTCGACTGGTTCAACAATCGGCGGCTCCTGTC 350461
Query 50639 AAGGCTGGGCCATATTCCTCCGGCAGAAGCAGA-AAAAGCTTATTATGCTTCCATCGGAA 50697
| || | || || || |||||||| || |||| ||||||| || |||
Sbjct 350460 CTCCATTGGAAACATCCCCCCAGCAGAAGCGGAGGCTCGCTT-TTATGCT--CAGAAGAA 350404
Query 50698 AT--AATGATCTGGCAGCCTGAGTTCACAGATAAAATACTCTCCAGGAAACCCGGGGCGG 50755
|| ||| | || || | |||||| | | ||||| |||||| |||||||||||
Sbjct 350403 ATCACATGCATTAGCTGCGT-AGTTCAGATAAAAAAT-GTCTCCACAAAACCCGGGGCAA 350346
Query 50756 TTCA 50759
||||
Sbjct 350345 TTCA 350342
>seq4902
Length=30050
Score = 147 bits (162), Expect = 8e-31
Identities = 281/410 (69%), Gaps = 18/410 (4%)
Strand=Plus/Minus
Query 53059 GCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTT 53118
||| ||||| | |||||||||||||| ||||||||||||||| || |||||||| ||
Sbjct 15202 GCTCTGGGTTTCGGATTTTACTTACGTTTCCACATGGCAGGGCTTTGTGTATGTGGCTTT 15143
Query 53119 CATCATTGATGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATC----GTCCATGG 53174
||||||||||||||||||| | |||||||| ||||| ||||| || | ||||
Sbjct 15142 CATCATTGATGTGTTTGCCCGCGTGATTGTGGGCTGGCGCGTCTCGTCCACTGCCCATAC 15083
Query 53175 AGACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCG-ACCGTCCGGC 53233
||| ||| ||||||| || ||||||||||| | || ||| | | | | | ||
Sbjct 15082 CGAC----TTCATGCTGGACGCCCTGGAGCAGGC--TCTGTGCCAGAGGCAGCCTGAGGG 15029
Query 53234 A----CGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCG 53289
| | |||||| || || | ||| ||||| || | |||||| || |
Sbjct 15028 AAAAGTGACCCATCATTCGGACCGCGGCTGTCAATATGTGTCCATTCGCTACACGCAAAG 14969
Query 53290 GCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGC 53349
|| ||||| || | | || || || ||| || || || |||||||||||
Sbjct 14968 ACTGGCTGAAGCGGGCCTTGTTGCTTCTGTCGGTAGTGTTGGGGATTCCTATGACAACGC 14909
Query 53350 GATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTG 53406
|||| |||| ||| || || ||||||||| | || | || |||| || | ||
Sbjct 14908 CCTGGCAGAGACCATTAACGGACTTTACAAAACCGAATTGATCTACCGGCAGGGGCCGTG 14849
Query 53407 GAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGT 53456
||||||| | | | || |||||||| ||||| | ||||| |||||||
Sbjct 14848 GAAAAACAGGGACGCGGTCGAACTGGCAACACTTAAATGGGTCGACTGGT 14799
Score = 129 bits (142), Expect = 2e-25
Identities = 273/404 (68%), Gaps = 14/404 (3%)
Strand=Plus/Minus
Query 50223 TGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATC 50282
||||| | |||||||| | || ||||||||||||||| || |||||||| ||||||
Sbjct 15198 TGGGTTTCGGATTTTACTTACGTTTCCACATGGCAGGGCTTTGTGTATGTGGCTTTCATC 15139
Query 50283 ATTGATGTGTTCGCCGGATACATCGTGGGATGGCAGGTCTCATC----ATCCATGGAAAC 50338
||||||||||| ||| | || ||||| |||| ||||| || |||| | |
Sbjct 15138 ATTGATGTGTTTGCCCGCGTGATTGTGGGCTGGCGCGTCTCGTCCACTGCCCAT---ACC 15082
Query 50339 AACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGCCGTCCGGCACA-- 50396
|| ||| ||||||| || ||||||||||| |||| | | ||| || | |
Sbjct 15081 GAC-TTCATGCTGGACGCCCTGGAGCAGGCTCTGTGCCAGAGGCAGCCTGAGGGAAAAGT 15023
Query 50397 -ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCTTAA 50455
| |||||| || || | ||| ||||| || | ||||||||| | ||
Sbjct 15022 GACCCATCATTCGGACCGCGGCTGTCAATATGTGTCCATTCGCTACACGCAAAGACTGGC 14963
Query 50456 GGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGATGGC 50515
||||| || | | || || || ||| ||| || || ||||||||||| ||||
Sbjct 14962 TGAAGCGGGCCTTGTTGCTTCTGTCGGTAGTGTTGGGGATTCCTATGACAACGCCCTGGC 14903
Query 50516 TGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAAAAA 50572
|||| ||| || || ||||||||| | || | || |||| || | ||||||||
Sbjct 14902 AGAGACCATTAACGGACTTTACAAAACCGAATTGATCTACCGGCAGGGGCCGTGGAAAAA 14843
Query 50573 CCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGT 50616
| || | || |||||||| ||||| | ||||| |||||||
Sbjct 14842 CAGGGACGCGGTCGAACTGGCAACACTTAAATGGGTCGACTGGT 14799
>seq4797
Length=43377
Score = 125 bits (138), Expect = 3e-24
Identities = 368/554 (66%), Gaps = 26/554 (5%)
Strand=Plus/Plus
Query 50221 TGTGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCA 50280
||||||| | ||||| || | || ||| ||||||||||| ||||||||||| ||||
Sbjct 10029 TGTGGGTTTCGGATTTCACGTATGTTTCCACTTGGCAGGGCTTTGTTTATGTGGCCTTCA 10088
Query 50281 TCATTGATGTGTTCGC-CGGATACATCGTGGGATGGCAGGTCTCATCATC----CATGGA 50335
||||||| || || || ||| | || ||||| |||| ||||| ||| | |||
Sbjct 10089 TCATTGACGTCTTTGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCAT--- 10144
Query 50336 AACAACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGCCGTCCGGCAC 50395
| | || ||||| |||||||| || |||||||| |||| | | ||| || |
Sbjct 10145 ACCGAC-TTCGTACTGGATGCCCTTGAGCAGGCTCTGTGCCAGAGGCAGCCTGAGGGAAA 10203
Query 50396 A---ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCT 50452
| | ||| || || || | ||| ||||| || | ||||||||| | ||
Sbjct 10204 AGTGACCCACCATTCCGACCGCGGCTGTCAATATGTGTCCATTCGCTACACGCAAAGACT 10263
Query 50453 TAAGGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGAT 50512
||||| || | | || || || ||| ||| || || ||||| ||||| |
Sbjct 10264 GGCTGAAGCGGGGCTCGTTGCTTCTGTCGGCAGTGTTGGGGATTCCTATGATAACGCCTT 10323
Query 50513 GGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 50569
||| |||| ||| || || ||||||||| | || | || | || || | |||||
Sbjct 10324 GGCAGAGACCATTAACGGACTTTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 10383
Query 50570 AAACCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG 50629
|||| || || || |||||||| ||||| | ||||| ||||||| || ||||| ||
Sbjct 10384 AAACAGGGAAGCTGTTGAACTGGCAACACTTAAATGGGTCGACTGGTTCAATAATCGGCG 10443
Query 50630 ATTGCTGGAAAGGCTGGGCCATATTCCTCCGGCAGAAGCAGA-AAAAGCTTATTATGCTT 50688
| ||| | || | || || || |||||||| || | |||| ||||||
Sbjct 10444 GCTCCTGTCCTCCATTGGAAACATCCCGCCAGCAGAAGCTGAGGCACGCTT-TTATGC-- 10500
Query 50689 CCATCGGAAAT--AATGATCTGGCAGCCTGAGTTCACAGATAAAATAC-TCTCCAGGAAA 50745
|| | ||||| ||| | || || | | | ||||||||| || |||||| |||
Sbjct 10501 ACAACAGAAATCACATGCATTAGCCGCTTAAAT---CAGATAAAAAACGTCTCCACAAAA 10557
Query 50746 CCCGGGGCGGTTCA 50759
|||||||| ||||
Sbjct 10558 CCCGGGGCAATTCA 10571
Score = 118 bits (130), Expect = 4e-22
Identities = 367/554 (66%), Gaps = 27/554 (5%)
Strand=Plus/Plus
Query 50221 TGTGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCA 50280
||||||| | ||||| || | || ||| ||||||||||| ||||||||||| ||||
Sbjct 871 TGTGGGTTTCGGATTTCACGTATGTTTCCACTTGGCAGGGCTTTGTTTATGTGGCCTTCA 930
Query 50281 TCATTGATGTGTTCGC-CGGATACATCGTGGGATGGCAGGTCTCATCATC----CATGGA 50335
||||||| || || || ||| | || ||||| |||| ||||| ||| | |||
Sbjct 931 TCATTGACGTCTTTGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCAT--- 986
Query 50336 AACAACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGCCGTCCGGCAC 50395
| | || ||||| |||||||| || |||||||| |||| | | ||| || |
Sbjct 987 ACCGAC-TTCGTACTGGATGCCCTTGAGCAGGCTCTGTGCCAGAGGCAGCCTGAGGGAAA 1045
Query 50396 A---ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCT 50452
| | ||| || || || | ||| |||| || | ||||||||| | ||
Sbjct 1046 AGTGACCCACCATTCCGACCGCGGCTGTCAATATGCGTCCATTCGCTACACGCAAAGACT 1105
Query 50453 TAAGGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGAT 50512
|||| ||| | | || || || ||| ||| || || ||||| ||||| |
Sbjct 1106 GGCTGAAG-CGGGCTCGTTGCTTCTGTCGGCAGTGTTGGGGATTCCTATGATAACGCCTT 1164
Query 50513 GGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 50569
||| |||| ||| || || ||||||||| | || | || | || || | |||||
Sbjct 1165 GGCAGAGACCATTAACGGACTTTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 1224
Query 50570 AAACCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG 50629
|||| || || || |||||||| ||||| | ||||| ||||||| || ||||| ||
Sbjct 1225 AAACAGGGAAGCTGTTGAACTGGCAACACTTAAATGGGTCGACTGGTTCAATAATCGGCG 1284
Query 50630 ATTGCTGGAAAGGCTGGGCCATATTCCTCCGGCAGAAGCAGA-AAAAGCTTATTATGCTT 50688
| ||| | || | || || || |||||||| || | |||| ||||||
Sbjct 1285 GCTCCTGTCCTCCATTGGAAACATCCCGCCAGCAGAAGCTGAGGCACGCTT-TTATGC-- 1341
Query 50689 CCATCGGAAAT--AATGATCTGGCAGCCTGAGTTCACAGATAAAATAC-TCTCCAGGAAA 50745
|| | ||||| ||| | || || | | | ||||||||| || |||||| |||
Sbjct 1342 ACAACAGAAATCACATGCATTAGCCGCTTAAAT---CAGATAAAAAACGTCTCCACAAAA 1398
Query 50746 CCCGGGGCGGTTCA 50759
|||||||| ||||
Sbjct 1399 CCCGGGGCAATTCA 1412
Score = 116 bits (128), Expect = 1e-21
Identities = 283/420 (67%), Gaps = 14/420 (3%)
Strand=Plus/Plus
Query 53060 CTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTC 53119
|||||||| | ||||| || || || ||| ||||||||||| || |||||||| |||
Sbjct 10028 CTGTGGGTTTCGGATTTCACGTATGTTTCCACTTGGCAGGGCTTTGTTTATGTGGCCTTC 10087
Query 53120 ATCATTGATGTGTTTGC-CGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGA- 53177
|||||||| || ||||| ||| | |||||||| ||||| ||||| || | | |
Sbjct 10088 ATCATTGACGTCTTTGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCATAC 10146
Query 53178 CGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCG-ACCGTCCGGCA-- 53234
|||| ||||| |||||||| || |||||||| | || ||| | | | | | || |
Sbjct 10147 CGAC-TTCGTACTGGATGCCCTTGAGCAGGC--TCTGTGCCAGAGGCAGCCTGAGGGAAA 10203
Query 53235 --CGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCT 53292
| ||| || || || | ||| ||||| || | |||||| || | ||
Sbjct 10204 AGTGACCCACCATTCCGACCGCGGCTGTCAATATGTGTCCATTCGCTACACGCAAAGACT 10263
Query 53293 TAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGAT 53352
||||| || | | || || || ||| || || || ||||| ||||| |
Sbjct 10264 GGCTGAAGCGGGGCTCGTTGCTTCTGTCGGCAGTGTTGGGGATTCCTATGATAACGCCTT 10323
Query 53353 GGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 53409
||| |||| ||| || || ||||||||| | || | || | || || | |||||
Sbjct 10324 GGCAGAGACCATTAACGGACTTTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 10383
Query 53410 AAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACG 53469
|||| | | || || |||||||| ||||| | ||||| ||||||| || ||||| ||
Sbjct 10384 AAACAGGGAAGCTGTTGAACTGGCAACACTTAAATGGGTCGACTGGTTCAATAATCGGCG 10443
Score = 109 bits (120), Expect = 2e-19
Identities = 282/420 (67%), Gaps = 15/420 (4%)
Strand=Plus/Plus
Query 53060 CTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTC 53119
|||||||| | ||||| || || || ||| ||||||||||| || |||||||| |||
Sbjct 870 CTGTGGGTTTCGGATTTCACGTATGTTTCCACTTGGCAGGGCTTTGTTTATGTGGCCTTC 929
Query 53120 ATCATTGATGTGTTTGC-CGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGA- 53177
|||||||| || ||||| ||| | |||||||| ||||| ||||| || | | |
Sbjct 930 ATCATTGACGTCTTTGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCATAC 988
Query 53178 CGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCG-ACCGTCCGGCA-- 53234
|||| ||||| |||||||| || |||||||| | || ||| | | | | | || |
Sbjct 989 CGAC-TTCGTACTGGATGCCCTTGAGCAGGC--TCTGTGCCAGAGGCAGCCTGAGGGAAA 1045
Query 53235 --CGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCT 53292
| ||| || || || | ||| |||| || | |||||| || | ||
Sbjct 1046 AGTGACCCACCATTCCGACCGCGGCTGTCAATATGCGTCCATTCGCTACACGCAAAGACT 1105
Query 53293 TAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGAT 53352
|||| ||| | | || || || ||| || || || ||||| ||||| |
Sbjct 1106 GGCTGAAG-CGGGCTCGTTGCTTCTGTCGGCAGTGTTGGGGATTCCTATGATAACGCCTT 1164
Query 53353 GGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 53409
||| |||| ||| || || ||||||||| | || | || | || || | |||||
Sbjct 1165 GGCAGAGACCATTAACGGACTTTACAAAACCGAACTCATCTATCGGCAGGGGCCATGGAA 1224
Query 53410 AAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACG 53469
|||| | | || || |||||||| ||||| | ||||| ||||||| || ||||| ||
Sbjct 1225 AAACAGGGAAGCTGTTGAACTGGCAACACTTAAATGGGTCGACTGGTTCAATAATCGGCG 1284
>seq3455
Length=1029
Score = 113 bits (124), Expect = 2e-20
Identities = 282/421 (67%), Gaps = 17/421 (4%)
Strand=Plus/Minus
Query 50221 TGTGGGTGGCTGATTTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCA 50280
||||||| | ||||| || | || ||| ||||||||||| |||||| | | ||||
Sbjct 432 TGTGGGTTTCGGATTTCACGTATGTTTCCACCTGGCAGGGCTTTGTTTATTTCGTCTTCA 373
Query 50281 TCATTGATGTGTTCGC-CGGATACATCGTGGGATGGCAGGTCTCATCATC----CATGGA 50335
|||||||||| ||||| ||| | || ||||| |||| ||||| ||| | |||
Sbjct 372 TCATTGATGTATTCGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCAT--- 317
Query 50336 AACAACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGCCGTCCGGCAC 50395
| | || |||||||||||||| || |||||||| |||| | | ||| || |
Sbjct 316 ACCGAC-TTCGTGCTGGATGCCCTCGAGCAGGCTCTGTGCCAGAGGCAGCCTGAGGGAAA 258
Query 50396 A---ATCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCT 50452
| | ||| || || || | ||| ||||| || | ||||||||| | ||
Sbjct 257 AGTGACCCACCATTCCGACCGCGGATGTCAATATGTGTCCATTCGCTACACGCAAAGACT 198
Query 50453 TAAGGAAGCCGGATTACTGGCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGAT 50512
||||| || | | || || || ||| ||| || || ||||| ||||| |
Sbjct 197 GGCTGAAGCGGGCCTTGTTGCTTCTGTCGGAAGTGTTGGGGATTCCTATGATAACGCTTT 138
Query 50513 GGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 50569
||| |||| ||| || || ||||||||| || | || |||| || | |||||
Sbjct 137 GGCGGAGACCATTAACGGACTTTACAAAATCGAATTGATCTACCGGCAGGGACCATGGAA 78
Query 50570 AAACCGGACAGAAGTGGAACTGGCCACAC-TAACGTGGGTGGACTGGTATAACAATCGAC 50628
|||| || || || || ||||| |||| ||| ||||| ||||||| || ||||| |
Sbjct 77 AAACAGGGAAGCTGTTGAGCTGGCAACACTTAAACTGGGTCGACTGGTTCAATAATCGGC 18
Query 50629 G 50629
|
Sbjct 17 G 17
Score = 105 bits (116), Expect = 2e-18
Identities = 282/421 (67%), Gaps = 15/421 (4%)
Strand=Plus/Minus
Query 53060 CTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTC 53119
|||||||| | ||||| || || || ||| ||||||||||| || ||| | | |||
Sbjct 433 CTGTGGGTTTCGGATTTCACGTATGTTTCCACCTGGCAGGGCTTTGTTTATTTCGTCTTC 374
Query 53120 ATCATTGATGTGTTTGC-CGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGA- 53177
||||||||||| || || ||| | |||||||| ||||| ||||| || | | |
Sbjct 373 ATCATTGATGTATTCGCACGGGT-TATTGTGGGTTGGCGTGTCTCCTCAACGGCTCATAC 315
Query 53178 CGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCG-ACCGTCCGGCA-- 53234
|||| |||||||||||||| || |||||||| | || ||| | | | | | || |
Sbjct 314 CGAC-TTCGTGCTGGATGCCCTCGAGCAGGC--TCTGTGCCAGAGGCAGCCTGAGGGAAA 258
Query 53235 --CGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCT 53292
| ||| || || || | ||| ||||| || | |||||| || | ||
Sbjct 257 AGTGACCCACCATTCCGACCGCGGATGTCAATATGTGTCCATTCGCTACACGCAAAGACT 198
Query 53293 TAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGAT 53352
||||| || | | || || |||||| || || || ||||| ||||| |
Sbjct 197 GGCTGAAGCGGGCCTTGTTGCTTCTGTCGGAAGTGTTGGGGATTCCTATGATAACGCTTT 138
Query 53353 GGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG---CTGGAA 53409
|||||||| ||| || || ||||||||| || | || |||| || | |||||
Sbjct 137 GGCGGAGACCATTAACGGACTTTACAAAATCGAATTGATCTACCGGCAGGGACCATGGAA 78
Query 53410 AAACCGTGCAGAAGTGGAACTGGCCACAC-TCACGTGGGTGGACTGGTATAACAATCGAC 53468
|||| | | || || || ||||| |||| | | ||||| ||||||| || ||||| |
Sbjct 77 AAACAGGGAAGCTGTTGAGCTGGCAACACTTAAACTGGGTCGACTGGTTCAATAATCGGC 18
Query 53469 G 53469
|
Sbjct 17 G 17
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185243090334664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |