Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_004927.1 Length=75898 Score E Sequences producing significant alignments: (Bits) Value seq5094 82.4 4e-11 seq4953 82.4 4e-11 >seq5094 Length=366253 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCC 20797 |||||||||||||||||| |||||||||||||||||| ||||| |||||||| || Sbjct 365870 TAGCTCAGTTGGTAGAGCACCTGACTGTTAATCAGGTTGTCGACGGTTCGAGCCC 365816 >seq4953 Length=802672 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCC 20797 |||||||||||||||||| |||||||||||||||||| ||||| |||||||| || Sbjct 218546 TAGCTCAGTTGGTAGAGCACCTGACTGTTAATCAGGTTGTCGACGGTTCGAGCCC 218492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242733590346359