Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4810 95.1 8e-15
>seq4810
Length=1195048
Score = 95.1 bits (104), Expect = 8e-15
Identities = 153/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||| ||||||||||| || ||||| || || || |||||||| ||||| || || |
Sbjct 316974 CGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCG 316915
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| |||||||| ||| || | ||| |||||||| | ||| ||||| || ||
Sbjct 316914 TCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTG 316855
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | ||| || || | | || |||||| ||| | || || || ||
Sbjct 316854 TCCTGGATCTTGGCC---TTGACGTTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTG 316798
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || || || || | ||| || ||||| || ||||||
Sbjct 316797 ATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCATG 316759
Score = 84.2 bits (92), Expect = 1e-11
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||| ||||| || | || ||||| || || || |||||||| |||| || || |
Sbjct 316518 CGCAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCG 316459
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| |||||||| ||| || | ||| |||||||| | ||| ||||| || ||
Sbjct 316458 TCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTG 316399
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| ||| |||| | || | | || |||||| ||| | || || || ||
Sbjct 316398 TCCTGGATCTTGGCCT---TGACGTTCTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTG 316342
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || || || || | ||| || ||||| |||||||||||
Sbjct 316341 ATAGTCTTGCCGGTCAAAGTCTTGACGAAGATTTGCATGTT 316301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318757626690618
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |