Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq5094 82.4 8e-11
>seq5094
Length=366253
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 137005 ACGGCTTAACTGTTCCATAACTTGATCAAAATGGTTTTTGTAAATGTGAGTATCTCCACC 137064
||| || || |||||| | || || |||| ||| || |||||||||||| ||||| |
Sbjct 188690 ACGACTCAATTGTTCCTTTACCTGTTCAATATGATTACTGTAAATGTGAGCATCTC--CT 188633
Query 137065 AGAGAA--AATCAGTTCTCCTACCTCAAGATCACACATTTTCGCTATGATGTGAGTTAAC 137122
|||| | || | || || ||||||| | | ||| || || | || ||| ||
Sbjct 188632 AGAGTATGAACAAAATCACCGGGCTCAAGACCTACCTCTTTTGCAATTAAGTTAGTCAAA 188573
Query 137123 AGCGCATAGCTGGCGACGTTAAAGGGCAAGCCCAAAAAGCTGTCTACGCTTCGCTGAAAC 137182
|| ||||| || |||| |||||| || | || | || |||| | || |||||| ||
Sbjct 188572 AGAGCATAACTAGCGATGTTAAACGGAACTCCAAGGAAAATGTCGCCACTCCGCTGATAC 188513
Query 137183 CACATACAAGACAGTTTACCTTCATTGACGTAGAATTG 137220
|| ||| |||||| || || || ||||| |||||
Sbjct 188512 AACTGGCAACTCAGTTTTCCGTCGTTAACGTAAAATTG 188475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524695879564080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |