Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq5094 82.4 8e-11 >seq5094 Length=366253 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 137005 ACGGCTTAACTGTTCCATAACTTGATCAAAATGGTTTTTGTAAATGTGAGTATCTCCACC 137064 ||| || || |||||| | || || |||| ||| || |||||||||||| ||||| | Sbjct 188690 ACGACTCAATTGTTCCTTTACCTGTTCAATATGATTACTGTAAATGTGAGCATCTC--CT 188633 Query 137065 AGAGAA--AATCAGTTCTCCTACCTCAAGATCACACATTTTCGCTATGATGTGAGTTAAC 137122 |||| | || | || || ||||||| | | ||| || || | || ||| || Sbjct 188632 AGAGTATGAACAAAATCACCGGGCTCAAGACCTACCTCTTTTGCAATTAAGTTAGTCAAA 188573 Query 137123 AGCGCATAGCTGGCGACGTTAAAGGGCAAGCCCAAAAAGCTGTCTACGCTTCGCTGAAAC 137182 || ||||| || |||| |||||| || | || | || |||| | || |||||| || Sbjct 188572 AGAGCATAACTAGCGATGTTAAACGGAACTCCAAGGAAAATGTCGCCACTCCGCTGATAC 188513 Query 137183 CACATACAAGACAGTTTACCTTCATTGACGTAGAATTG 137220 || ||| |||||| || || || ||||| ||||| Sbjct 188512 AACTGGCAACTCAGTTTTCCGTCGTTAACGTAAAATTG 188475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524695879564080