Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq4198 86.0 9e-12
seq4968 84.2 3e-11
seq3563 84.2 3e-11
>seq4198
Length=487851
Score = 86.0 bits (94), Expect = 9e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070
||| ||||||| | || ||||||| | ||||||| ||||||||||| ||||||||||||
Sbjct 42806 TGGTGCCCCCAGTAGGATTTGAACCCACGACCTACCGCTTACAAGGCGGTTGCTCTACCA 42747
Query 108071 CTGAGCTATA 108080
||||||||||
Sbjct 42746 CTGAGCTATA 42737
>seq4968
Length=441983
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 69632 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 69691
Query 108370 GAACGG 108375
||||||
Sbjct 69692 GAACGG 69697
>seq3563
Length=101223
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 25521 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 25580
Query 108370 GAACGG 108375
||||||
Sbjct 25581 GAACGG 25586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746172845985840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |