Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4765 167 5e-36
seq4678 91.5 3e-13
>seq4765
Length=3541379
Score = 167 bits (184), Expect = 5e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || ||||| || |||||||| ||||||||||| || || | || ||||| || ||
Sbjct 2921424 TGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 2921483
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || || | ||| ||||| ||||| ||||||||||| |||||||||||
Sbjct 2921484 TTGCCAGCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTG 2921543
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
||||| |||||||| | || || ||||| ||||| || || || ||||| || ||
Sbjct 2921544 GCTTTGACATTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTG 2921603
Query 104537 AGTGTTTTTACAAATATCTGCATTTTGTGT 104566
|| || || || || |||||||| ||||||
Sbjct 2921604 AGGGTCTTCACGAAGATCTGCATCTTGTGT 2921633
>seq4678
Length=1229792
Score = 91.5 bits (100), Expect = 3e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936
|||||||| || ||||| ||||| || ||| || | || ||||||||||| | ||
Sbjct 1146817 GATGGTATTGTCAACGAGAATCTGGTGGAGCGCTTTAGCCAGGAGGTACAGATCACCGAG 1146758
Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996
||| | || ||||| || |||||||| || || || || | ||||| ||||||||||||
Sbjct 1146757 GCCCGCTGCTTTTATGGCTTCCAGATCGCCATGGAGAACGTGCATTCGGAGATGTACAGT 1146698
Query 268997 CTATTAATAGATACTTATAT 269016
| | || || ||||| ||
Sbjct 1146697 GTGCTGATCGACACTTACAT 1146678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151322558466828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |