Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq5094 84.2 3e-11 >seq5094 Length=366253 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 164822 ATCGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCA 164881 |||||||||| || ||||||||||| || ||| ||||||| ||| ||||||| |||||| Sbjct 1275 ATCGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCA 1334 Query 164882 AATCCCACTCCCGC 164895 ||||| ||||||| Sbjct 1335 AATCCAGCTCCCGC 1348 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 164822 ATCGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCA 164881 |||||||||| || ||||||||||| || ||| ||||||| ||| ||||||| |||||| Sbjct 1892 ATCGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCA 1951 Query 164882 AATCCCACTCCCGC 164895 ||||| ||||||| Sbjct 1952 AATCCAGCTCCCGC 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627927645206400