Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq4953 114 1e-20 >seq4953 Length=802672 Score = 114 bits (126), Expect = 1e-20 Identities = 176/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033 || ||||| | || || ||| ||| ||||||| || ||||| || |||||||| ||| Sbjct 77684 TCACCTGGTTTTAGAAAAGCAGCATAAGCAGCTTGATTAGCCTGAGACCCGGAATGAGGT 77743 Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCG 7093 ||||||||| || | | || ||| |||||||| || | | ||| || | |||| Sbjct 77744 TGAACGTTTACGTATTCCGCACCAAATAGTTCTTTTGCTCTATTAATGGCTAAAGTCTCA 77803 Query 7094 ATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATAC 7153 | || ||| | | |||| || || ||||| || | || |||||||| || || ||| Sbjct 77804 ACCTTATCAACATACTCACATCCACCATAATATCGATGACCAGGATATCCTTCTGCGTAC 77863 Query 7154 TTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGAT 7213 || ||||| |||| ||||||||||| | |||| | | || || |||||||| Sbjct 77864 TTATTGGTTAAAACTGAACCTTGCGCAGCCCGAACACCCTTCGAAGCAATATTTTCGGAA 77923 Query 7214 GCAATCAAGC 7223 ||||| |||| Sbjct 77924 GCAAT-AAGC 77932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553318040114280