Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 114 1e-20
>seq4953
Length=802672
Score = 114 bits (126), Expect = 1e-20
Identities = 176/250 (70%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033
|| ||||| | || || ||| ||| ||||||| || ||||| || |||||||| |||
Sbjct 77684 TCACCTGGTTTTAGAAAAGCAGCATAAGCAGCTTGATTAGCCTGAGACCCGGAATGAGGT 77743
Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCG 7093
||||||||| || | | || ||| |||||||| || | | ||| || | ||||
Sbjct 77744 TGAACGTTTACGTATTCCGCACCAAATAGTTCTTTTGCTCTATTAATGGCTAAAGTCTCA 77803
Query 7094 ATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATAC 7153
| || ||| | | |||| || || ||||| || | || |||||||| || || |||
Sbjct 77804 ACCTTATCAACATACTCACATCCACCATAATATCGATGACCAGGATATCCTTCTGCGTAC 77863
Query 7154 TTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGAT 7213
|| ||||| |||| ||||||||||| | |||| | | || || ||||||||
Sbjct 77864 TTATTGGTTAAAACTGAACCTTGCGCAGCCCGAACACCCTTCGAAGCAATATTTTCGGAA 77923
Query 7214 GCAATCAAGC 7223
||||| ||||
Sbjct 77924 GCAAT-AAGC 77932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553318040114280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |