Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq4953 266 9e-67 >seq4953 Length=802672 Score = 266 bits (294), Expect = 9e-67 Identities = 564/835 (68%), Gaps = 10/835 (1%) Strand=Plus/Plus Query 26037 ACAAACAtttttttACCTTCTACATTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTA 26096 || |||| || || || || || ||||| | | || |||||||||| |||||| | Sbjct 673975 ACTAACAACTTCTTTCCCTCCACGTTTTTGTAGGCACCCTTTTGAAATTGGGATGCAGAA 674034 Query 26097 CCAAAATATTCTTTATACTGTTTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCG 26156 ||||| |||||||| || | || ||||| |||||| ||| ||| || || |||| Sbjct 674035 CCAAAGTATTCTTTGTATTCCTTCCCATCTTTTTCTACTTTTTGACCCGGAGACTCTTGA 674094 Query 26157 TGTGCCGCAAATAATGAACCAATCATGACCATTGATGCACCAAATCTAATTGACTTAGCG 26216 || ||||||| | || || |||||| ||||| |||||||| | ||| || || ||| Sbjct 674095 TGGCCCGCAAACATCGATCCGATCATGCACATTGTAGCACCAAAGCGAATCGATTTCGCG 674154 Query 26217 ATGTCGCCATGCGTTCTTATGCCACCATCGGCAATCAAAGGTTTACGAGCTGCTTTACTA 26276 ||||| |||| || | || || || || || || | ||||| | ||| |||| | Sbjct 674155 ATGTCACCATCGGTCCGAATCCCTCCGTCAGCGATGATGGGTTTTCTGGCTCCTTTCGCA 674214 Query 26277 CATATGTTTAATGCC-GCTAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGT 26335 || || |||| | |||| ||||| || || || |||||||| || |||||||| || Sbjct 674215 CA-ATAGCGAATGGCAGCTAGTTGCCATCCCCCGGTTCCAAAACCGGTCTTAATCTTAGT 674273 Query 26336 AATACAAACTCTACCAGGACCTATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAA 26395 || || | | || || || || ||||| ||||| || || ||||| |||||||| | Sbjct 674274 GATGCAGGCCTTTCCGGGTCCAATTCCGACCTTGGTGGCGTCCGCACCCGCATTTTCAAG 674333 Query 26396 TTCTCTAACACCTTCTGGCGTACCAACATTACCAGCAATAACAAAACTATCAGGTATATG 26455 | | | ||| ||||||| || ||||| || |||||||| | |||| | | || || | Sbjct 674334 TGCCCGAACGGCTTCTGGGGTTCCAACGTTTCCAGCAATCAGAAAAGTGTTGGGCATCCG 674393 Query 26456 GGTTTTAATATGTTTAATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTAT 26515 |||| ||||||||||| || || || || |||| ||| || ||||| || || Sbjct 674394 TTCCTTAACGAACTTAATCATGTTGATGACCGAGTCCGAGTAACCGTGGGCAATGTCAAT 674453 Query 26516 TGTAATATATTCGGGGATTAATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGC 26575 || || ||||| || ||| | |||| | | | | ||| ||||| |||| Sbjct 674454 CGTGATGTATTCTGGAATTTGGTCGGCTTGGACCAGTTCCTTAATGAAATCGTATTCGTT 674513 Query 26576 TTTCTTTACACC--AACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATA 26633 ||| || || |||| || || ||||||| || | ||||| | ||| | | Sbjct 674514 GGGCTTAACCCCGATACTG--ATGGAGGCAAATACCCCATCGTCATGCATTTTTTTCACA 674571 Query 26634 AAAGGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCA 26693 ||| | | | |||| | |||||| ||||||| || |||||| |||||| ||| Sbjct 674572 AAATCAAGGCGTTTTTCTGGTTGAAAACGGTGCATGACGTAGAAGTAACCATTTTTAGCG 674631 Query 26694 AACCATTTCGCTAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGC 26753 | | | |||| | | || || || |||||||| || || || || || || | | Sbjct 674632 AGACTCTCGGCTAGGTCAGCGTTAATCACCGTTTGCATGTTAGCTGGTACGACCGGGATC 674691 Query 26754 TTGAATTTTTTCGG--ACCAAATTGGATAGTTGTATCACATTCTGATCTACTCTCAACTA 26811 ||||| || ||| ||||| | | | || |||||||| || | | ||| | Sbjct 674692 TTGAA--CTTACGGCCCCCAAACTCAACCGAAGTGTCACATTCGCTTCGAGAGTTAACCA 674749 Query 26812 TACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAATATTTTCATTTTTAT 26866 ||| ||||| || || | |||||||||||| || ||||| | | |||||| || Sbjct 674750 CACACTTATTCGGAATCAGTTGAATATCTTCGTAATCAAACACGTCCATTTTCAT 674804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146624648110366