Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4764 145 7e-30 seq4678 98.7 1e-15 >seq4764 Length=1750656 Score = 145 bits (160), Expect = 7e-30 Identities = 139/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| ||||| || || | | | ||||||||||||||||| ||||| |||||||||| Sbjct 341614 GAGGGCAAAATGCATGGTTTCTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGAGC 341673 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 | || || ||||||||||||||||| | || || ||||| | ||||| || ||| Sbjct 341674 CCCACGCCGGAGCAGGCGCTCGAGTACGCCATCCTGCTGAACGACAAGTACAGCCTGGAC 341733 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATA 71894 || |||||||| ||||| ||||| |||||||||||| ||| |||| | ||||||| Sbjct 341734 GGGCGCGATCCCAACGGCTATGTGGGTTGCATGTGGTCCATCGGCGGCGTCCACGATA 341791 >seq4678 Length=1229792 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685 ||||| | || | |||| ||||||||||| || ||||| || || |||||||| | Sbjct 1146103 TGGCCACGCCCATGCGCTGATACTCGCCCACCTTCTTCTCAAAGAAGTTGGTCTTGCCAT 1146162 Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745 | || || || | | ||| || | ||| ||||| |||||| | ||| | || Sbjct 1146163 CCAGCGAGATCATCTCCATGAAGTTGAACGGATTCTTGGTGTTGTAGATCTTTCCCACGC 1146222 Query 119746 CCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAAT 119805 ||| ||||| || ||| ||||| ||||||||||| ||||| | |||| | | | Sbjct 1146223 CCAGCTCGACCAGCAGACGATCGGCCACAAACTCAATGTACTGCGACATCAGGTCACAGT 1146282 Query 119806 TCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCG 119865 ||||||| | || | ||||| | |||| ||| | ||| |||| |||||||| || | Sbjct 1146283 TCATGCCGATCAGATTAACCGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGTCCACAG 1146342 Query 119866 CTTC 119869 | || Sbjct 1146343 CGTC 1146346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478631639957520