Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq4707 91.5 4e-15 >seq4707 Length=873142 Score = 91.5 bits (100), Expect = 4e-15 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 ||||| ||||| | | | || ||||| || |||||||||||||| || ||| || Sbjct 213218 CGAGTGTTTCCCAAAGTGACCAAGTGTACCTTCCACAAATACGGTCCCTCCGGCAATGTG 213159 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 | || | ||| ||||| ||| | || ||| ||| | ||||| |||||||||||| | Sbjct 213158 CAGAAGTTCGACGGACTGTGCGTGCTGCCGCTGAATATTGTCAATGAGAAGATCTACGTG 213099 Query 3463 TTCCTCTGGTTCTGGTTC 3480 ||||| |||||||||||| Sbjct 213098 TTCCTTTGGTTCTGGTTC 213081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479298253500