Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq5094 136 6e-27 >seq5094 Length=366253 Score = 136 bits (150), Expect = 6e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136 ||||||| || ||| || || | ||||||| ||| || || |||||||| |||||| Sbjct 182381 ATTATTTAACAGCTTCCTTTAAAGCCTTACCAGGTTTAAAGGCAGGTACTTTACTTGCAG 182322 Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196 |||| ||||||| |||| ||||| ||||||||||| |||||||| ||||| | ||| Sbjct 182321 GGATTTGAATTTCTGCACCTGTTTGAGGGTTACGTCCTTTACGAGCGGCACGATTACGTA 182262 Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACTTTGTTACCTTCTGCTAAAGCGTTTGTGA 164256 |||||| ||||||| ||||| || ||||| || | ||| | | || || | || Sbjct 182261 CTTCGAAATTACCAAAACCGATCAATTGTACCTTCTCACCGTGAGTCAACTTGTCTTGGA 182202 Query 164257 TACCGCCAAATACTGCGTCTACAGCTTTTGTAGCATCCTTTTTAG 164301 | | |||| ||||| || | |||| || ||||| ||||||| Sbjct 182201 TTGAGTCAAAGACTGCATCCAAAGCTGCGGTGGCATCTTTTTTAG 182157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700460583758880