Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4644 136 9e-27
seq4765 131 4e-25
seq4810 125 2e-23
seq4863 98.7 2e-15
>seq4644
Length=1132839
Score = 136 bits (150), Expect = 9e-27
Identities = 148/195 (76%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| |||||||||||||| | || || || ||||||
Sbjct 752270 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCGAAG 752211
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || |||| |||||||| || || |||||||| || || |||||
Sbjct 752210 ATCAAACGCTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACA 752154
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || | ||||| ||||| ||||| ||||||||
Sbjct 752153 TTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTC 752094
Query 288460 ACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 752093 ACGAAGATCTGCATT 752079
Score = 132 bits (146), Expect = 1e-25
Identities = 147/195 (75%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||||||||| || | || || || ||||||
Sbjct 752726 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 752667
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || ||||||| ||||| || || || |||||||| || |||||
Sbjct 752666 ATCAAACGCTGCTG---ATCTGGGGGTATTCCCTCCTTGTCTTGGATTTTGGCCTTCACA 752610
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || ||||| || ||||| ||||| || ||||| |||||
Sbjct 752609 TTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTCCAGTCAGGGTCTTC 752550
Query 288460 ACGAATATCTGCATT 288474
|| || |||||||||
Sbjct 752549 ACAAAGATCTGCATT 752535
Score = 127 bits (140), Expect = 5e-24
Identities = 146/195 (75%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||||||||| || | || || || ||||||
Sbjct 752498 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 752439
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || |||| |||||||| || || |||||||| || || |||||
Sbjct 752438 ATCAAACGCTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACA 752382
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || | ||||| ||||| |||||||| |||||
Sbjct 752381 TTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTCCGGTCAGGGTCTTC 752322
Query 288460 ACGAATATCTGCATT 288474
|| || |||||||||
Sbjct 752321 ACAAAGATCTGCATT 752307
Score = 114 bits (126), Expect = 3e-20
Identities = 151/207 (73%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||||||||| || | || || || ||||||
Sbjct 751813 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 751754
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || |||| |||||||| || || |||||||| || || |||||
Sbjct 751753 ATCAAACGCTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACA 751697
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || | ||| || || | ||||| ||||| || |||| || ||
Sbjct 751696 TTCTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTTTCCAGTCAAGGTTTTC 751637
Query 288460 ACGAATATCTGCATTATG--TTATTCT 288484
|| || ||||||||| | |||||||
Sbjct 751636 ACAAAGATCTGCATTTCGAATTATTCT 751610
>seq4765
Length=3541379
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || |||||||| | ||| ||||| || ||||| | || || || || |||
Sbjct 2921436 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 2921495
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| || ||||||||||| ||||| || || ||||| ||
Sbjct 2921496 ATCAGACGCTGCTG---ATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 2921552
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| |||| || || ||| || || || ||||| ||||| || || || |||||
Sbjct 2921553 TTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTC 2921612
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 2921613 ACGAAGATCTGCAT 2921626
>seq4810
Length=1195048
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| ||||| || || || | || ||||| || |||
Sbjct 316722 TCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCCTCCAGCTGCTTTCCGGCAAAG 316663
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||||| || || || || |||||||| || || || |||
Sbjct 316662 ATCAGACGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 316606
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| | || || || || ||||| ||||| ||||||| |||||||
Sbjct 316605 TTCTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTG 316546
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 316545 ACGAAGATCTGCAT 316532
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||| || ||||||||||| || | || ||||| || |||
Sbjct 316494 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCAAAG 316435
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||||| || || || || |||||||| || || || |||
Sbjct 316434 ATCAGACGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 316378
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| ||||||| |||||||
Sbjct 316377 TTCTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTG 316318
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 316317 ACGAAGATTTGCAT 316304
Score = 116 bits (128), Expect = 9e-21
Identities = 143/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||| | ||||||||||| || | || ||||| || |||
Sbjct 316950 TCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCAAAG 316891
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||||| || || || || |||||||| || || || |||
Sbjct 316890 ATCAGACGCTGCTGG---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 316834
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || |||| |||||||
Sbjct 316833 TTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTG 316774
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 316773 ACGAAGATCTGCAT 316760
>seq4863
Length=1240122
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||| || || || | || || || || |||
Sbjct 1064069 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 1064010
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || ||||||| || || || || |||||||| || || || ||
Sbjct 1064009 ATCAGACGCTGCTG---ATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1063953
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || | || || || || ||||| ||||| ||||| || || ||
Sbjct 1063952 TTCTCGATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTTTTC 1063893
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 1063892 ACGAAGATCTGCAT 1063879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179576697270598
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |