Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_009904.1
Length=142072
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 351 9e-92
seq16 104 2e-17
seq5094 91.5 1e-13
>seq4953
Length=802672
Score = 351 bits (388), Expect = 9e-92
Identities = 1995/3159 (63%), Gaps = 100/3159 (3%)
Strand=Plus/Minus
Query 130766 ATAGTCCGCATCGGTTACTGGTTCTACTTTACCTAATAAGTACCCATTACCTACCTGAGA 130825
|||||| | ||| | | | |||||| || |||| ||| || ||||| || || ||
Sbjct 187983 ATAGTCGGAATCACTCATAGCTTCTACGTTTCCTAGACGGTAACCGTTACCCACTTGTGA 187924
Query 130826 GAAGAAGTCATGGTTACTAGTTGTTGTAGAGATACCATTCATTACAATAGGGTTTACGTC 130885
|||||||||||||||| |||| || || || || ||||| ||||| || || || ||
Sbjct 187923 GAAGAAGTCATGGTTAACCGTTGCCGTTGAAATTCCGTTCATAACAATTGGATTAACATC 187864
Query 130886 TGCACTTGTTGTTGGGAATAAAGGGTTCATC-CCTAAGTTAGCTAGAGCTTTATTTAAAT 130944
| | || ||| ||| | | || || | |||| || || ||||| || ||
Sbjct 187863 TTC-CTCAGTGTCGGGGAACATTGGATCCTGTCCTAGATTCATTAATGCTTTGTTGGCAT 187805
Query 130945 TGTACTCCAAAAATGTATTAACATCTTTTGTCCAACCAATCTCACTATATAGTTCAGCAG 131004
|||| | || || ||| || | ||||| || | | | || || | ||
Sbjct 187804 TGTAACGAATGAAGGTTAAAACGTCGTCAGTCCACCCTACTTGATCGTAAAGCAGATGAG 187745
Query 131005 TATACTGTGTTTCGTTCTCCCATAATTTAAATGCTA--AATCGAT-TAC--CCATTGTTC 131059
|||||| | |||||| | |||| | || || || | | ||| ||| | ||
Sbjct 187744 TATACTTTTCTTCGTTTTG--ATAA---AGATCGTACAAAAAGTTATACATCCAATCTTT 187690
Query 131060 CATTTCTTTTTGTTCAGTTTCTGGTAACTGGTTAAACCCTAACTGGTATTTATAGCCGAT 131119
| || |||||||| ||||| ||| || || ||| | ||| ||||||| || ||
Sbjct 187689 TAAGTCGTTTTGTTCGTTTTCTCCTAATTGATTGAACTGAACTTGGAATTTATAACCAAT 187630
Query 131120 ATAGGTTCCATGTACAGACTCGTCACGAATAATTAATTTAATAATTTCGGCTGTATTAAC 131179
|| |||||||| || || |||||||||||||| || || || || || || ||
Sbjct 187629 GTAAGTTCCATGAACGGATTCGTCACGAATAATCAACTTGATGATCTCAGCAACGTTTGG 187570
Query 131180 CATTTTTGCCTCACCTAAATAGCGTAGTGGTGTGTAAAAACCTGAGTAAAATAGGAAGCT 131239
| || | ||| | ||| | | || || || || || || || || || || |
Sbjct 187569 AAGTTCGTTATGACCAAGATACCAAATAGGGGTATAGAATCCAGAATAGAAAAGAAATGT 187510
Query 131240 CTCCAACAGTACGGATGCACTCTTTTTCTGTAGTGG-TGTACCGTTTCTATAAATATCGT 131298
|| | | || || | | || || | ||||| ||| | || ||| ||
Sbjct 187509 TTCAAGAAAGACACTTGAAATTTTCTTTTTAAGTGGATGTCCATCATCGTGGTATA--GT 187452
Query 131299 TAATAA----TATTAGCTTTATATTGTAAACGTTTATTTGTAGCTACCCATTCAAAGATA 131354
|||| | || | ||| | ||| | | || | ||| | ||| | ||||||
Sbjct 187451 GAATAGATTTTTTTGGTTTTGTTTTGAAGAAATTCTTCTGTGTCACTCCAATGAAAGATC 187392
Query 131355 TTGTCAATCTCTGTAGGTGTATTAAATGTGCTAAAAATTGTTGAATAACTTTTAGCGTGT 131414
| ||||| || ||| || || || || ||| |||| || ||||| ||||| |||
Sbjct 187391 TCATCAATTTCATCAGGGGTGTTCAAAGTCGAAAAGATTGAAGAGTAACTCTTAGCATGT 187332
Query 131415 ACTGCTTCCATAAAGGCTATGTTATTTAAAACAGCTTCTTCATGTTGTGTTCTTACATCA 131474
|||| ||||||||| |||||||||||||| || ||||||||| ||| ||||
Sbjct 187331 ACTGATTCCATAAACTGAATGTTATTTAAAACCGCAATTTCATGTTGCGTTACCGCATCT 187272
Query 131475 TCAAGTAGTGAGTGTACCCCCGATTCTGATTGAACTGTGTCTAATAATGTTAACCCACCA 131534
| | || | | || || || |||| || || | ||| |||||||| |||
Sbjct 187271 TTTCGAAGGGCTGCCATTCCGTCTTGAGACTGAAGGGTATCCAGTAAAGTTAACCCCCCA 187212
Query 131535 AACACTTTATTTATTAAATC--TTGCTCCATATCAGATAGCTTTGCCCAATCATTAACAT 131592
|| || | | | |||| || | |||| || ||| || || | ||
Sbjct 187211 AAGACGTGACCAAC--AATCCATTTGTGATCATCATCAAGTGAACGCCAGTCCTTTAGAT 187154
Query 131593 CGTTACCCACAGGGACACGTGTGTCCAACCAAAATTGCTCAGTAAGCTTTTTCCATGTGG 131652
|||| | || | | || || | ||| || ||||| || | |||| ||| || |
Sbjct 187153 CGTTTGATAGTGGAATTCTAGTATCAAGCCAGAACTGCTCGGTTAATTTTTCCCAGGTAG 187094
Query 131653 CTTGGTCAATTACATCATCAATCTTATTCCAGTTAATTCCTTCATA-----CTTTT--CT 131705
||| ||||||| |||||||||| |||||||||||| ||| || ||||| ||
Sbjct 187093 CTTTGTCAATTTCATCATCAATAGAATTCCAGTTAATCGCTTTGTAGTTTCCTTTTGACT 187034
Query 131706 TGC-----AA------ATTCATGTGCTCAT-----CTCCT------TAAATTGTACAACT 131743
| | || ||| |||| | | ||||| |||||| || ||
Sbjct 187033 TTCCGGTTAAGACTTTATTAATGTCCATGTATTTCCTCCTAAGGATTAAATTACGCAGCT 186974
Query 131744 TTCACACTCTGAAACCCCTACTTCGCTTCCGTCTTCTTCGGTGAATGTTCTAACATAATA 131803
|||||| || | || ||||| | | || || || || |||| || |||||
Sbjct 186973 TTCACATTCATTGGCACCAACTTCAGTA---TTATCGTCAGTAAAGGTTCGCACGTAATA 186917
Query 131804 AATTGTTTTTATACCTTTTTTCCATGCATAATGTCTTAATAAAGTTAAGTCCCGAGTGGA 131863
| || ||| || |||||||| | ||||||| || | | ||||| || | || ||
Sbjct 186916 GAGTGATTTAATGCCTTTTTTGTAAGCATAATTTCGAAGGATCGTTAAATCTCTGGTTGA 186857
Query 131864 TGTAGCGCCACC-CT-CCACCTT-CCAAGGATAAAGATTTTCTGGTAACTCTGAGCGCAT 131920
| | ||| || ||| ||| ||| ||||||| | ||| | ||| |||||
Sbjct 186856 CATTTTGTCACTTCTACCATCTTTCCATTCATAAAGACCCTTTGGAATGGTTGAACGCAT 186797
Query 131921 AAACAATGTTAAACTCATGCCTTGGTCAATATGTTTTTGTGCCGTTGCGTACACGTTAAT 131980
||| | ||||||||||| ||||| |||| || ||||| || | ||||| || | |||
Sbjct 186796 AAAGAGGGTTAAACTCATTCCTTGATCAACGTGCTTTTGAGCGGCAGCGTAAACATCAAT 186737
Query 131981 TACGTCAATCATACTGGTATCATACGCTGACTTGTAATATGGAATTGTCTTCTCAGATAA 132040
||| | | ||| || ||||| ||||| | || || ||||| || | | || |
Sbjct 186736 TACTTTACGCATGTCAGTGTCATAGGCTGATTCATAGTAAGGAATGGTGTCATTTGAAAG 186677
Query 132041 ACGAGGCGCAGGGTAATAAGTTTTACCTGTTTTACCATCTTGACGTTCTTCAATCATAGA 132100
|| || ||||| ||| | | || | || ||||| ||| ||||||| |
Sbjct 186676 GTATGGAGCCGGGTAGTAAATGGTTCCAATCTTTGATTCTTGGCGTGCTTCAATTTTTTG 186617
Query 132101 GATAATTGGGTGCAGTGAAGAGGTAGTCTCATTAACATAGGCAATACTACCATTCGGAGC 132160
| ||| || |||| | || | || || || ||| | |||||| |||||
Sbjct 186616 AACAATCGGATGCAAACTTGCTGTTGCATCCCCAATGTAAGCAGTTGAACCATTAGGAGC 186557
Query 132161 CACGGCTAAACGGTTTTGGTGGTATAGACCACTTTCAATAA-TGCTGTTTCTTAATGTTT 132219
||||| | || || || ||||| |||||| || || | || | || |||| | |
Sbjct 186556 TACGGCCATGCGATTCTGATGGTAGAGACCATACTCCATGACTGATTGTT-TTAAAGCGT 186498
Query 132220 CCCAATCTTTTACATTAGGTAGTACCACTCCATCAAATACTTCTGCCACCTTACTAGAGA 132279
||| |||||| | | || | | || |||||||| | | | || ||| ||
Sbjct 186497 TCCAGTCTTTTTCGGTTGGAATAAAGACGCCATCAAACAGTGATTTTACTTTATCTGAC- 186439
Query 132280 TTTCCTGACTTAGTGTTGGTACA-TATTCATCAAAGTAAGAGCCGTCTGCATACTTAGAG 132338
||| | | | | |||||| || | ||| || ||||| || || ||||| |||
Sbjct 186438 TTTGGAGCCCAACTCTTGGTAGTGTACTGATCGAAATAAGATCCATCAGCATATTTACTT 186379
Query 132339 TTCTCAAAGTTGTAGAATGTTGTGTCACGCTCTTTAGCAATCTTATTGCTTGCTACCAAA 132398
|| || || || | ||| | | | || || ||||| || | ||| || ||
Sbjct 186378 TTTTCGAAATTATGGAAAACTTTTCCGCGATCCTTAGCCATTTGATTAGAAGCCTTCAGG 186319
Query 132399 GTAGCATAATTAATTAATTCAAACAG--GGCATCTGTCATTTCAATAGATTCAGGTGAGC 132456
|| || || | || || | || || | || | |||||| || ||||||||||
Sbjct 186318 GTCCAGTAGTTTA--AAAGCATAAAGTAGGTACTGGTAAATTCAATGGACTCAGGTGAGC 186261
Query 132457 CGTATTCTACTTGGTTACTTGCGAACCACGCATGTAGCCCCATTGCCCCTAAACCGATTG 132516
| || | | || || | || || | | ||| || ||||| || || ||||| ||||
Sbjct 186260 CATAGTACATATGATTTTTAGCAAAATATGAATGAAGACCCATGGCTCCCAAACCAATTG 186201
Query 132517 TATGAGCTTTATCGTTACCATTCTTGATAGTAGGCACTGCTTTTATATTTGACACGTCTG 132576
||| | || || || | || | | || || | || || ||| || |
Sbjct 186200 AGTGACTTAGTTCATTTCCGTGTTTAACTGATGGAACCACGTTAATTGATGAGTGATCGG 186141
Query 132577 TAATATATGTTAGAGCTCTTACCATCGTCTCAATTGATGCCACTACATCATTAGATGTTT 132636
||| | ||||||||| | ||||| | |||| |||| | | || ||||
Sbjct 186140 TAACGAAGGTTAGAGCTTTCACCATGGCTTCAACTGATTTACCGAAGTCTGGTGATG--- 186084
Query 132637 CTAACAAGTTAAGGATGTTAATTGAACCTAAATTACAGCTAATGTCTGCACCTAACTCTT 132696
| | | ||| | | |||| | || || | |||||| | || | ||||||| ||
Sbjct 186083 CCATGAGGTTCACTACGTTAGTAGAGCCCAGATTACATGAGACATCGGTTCCTAACTGTT 186024
Query 132697 CGTATACTTGTTCATCATTTAGCTTAGATGGTGTCTGCACTTGAAGGATTTCTGAACATA 132756
|||| ||||||||| | | | || |||||||| || || || ||||| | ||| |
Sbjct 186023 CGTAGTTTTGTTCATCGTCAACGATGGAAGGTGTCTGAACCTGGAGAATTTCGGTACACA 185964
Query 132757 GATTGCTCATAATGATTTTGCCATCAATAGGATTGGCTTTATTTACAGTACTAACATTCA 132816
|||| ||||| | || ||||| |||| ||||| | || || || || || |
Sbjct 185963 GATTACTCATGACAATCTTGCCGTCAACCGGATTATCACGGTTAACGGTGTCAATGTTGA 185904
Query 132817 TAATATATGGGTAACCTGACTCTTGTTGTAAACGGCTAATTTCTTCTTCCAAATCTCGTG 132876
|||| ||||| || || || |||||||||| | ||||| ||| | || || |
Sbjct 185903 TAATGTATGGATAGCCAGATTCTTGTTGTAGTTTTCCGATTTCGGTTTCAAGTTCACGAG 185844
Query 132877 C---ATTCATTACCTTACTTCTGATATTTGGGTTCTGAATCATGTTATTGTATTCTGAAT 132933
| | || || |||| || | || ||||| | ||| || | ||||||| |
Sbjct 185843 CTCGAATCTTTTTCTTAGAAATGTTCTT---GTTCTTGACCATATTGTCGTATTCTTTAG 185787
Query 132934 CAATGTCTACAAATGAGAACGGTACACCGTATTCTTTAGCAACATCATATGGAGAAAATA 132993
||| || ||| ||||||| || || || || || |||||||||||||| ||||
Sbjct 185786 AAATATCAACATATGAGAAGGGAACTCCATACTCACGTTCAACATCATATGGACTGAATA 185727
Query 132994 AGTGAATTACATCCCCAGACTCAGCTAGCTCATAAAATTTATCGGGAACAACTACTCCCA 133053
|| || |||| || | ||| ||||||||||||||||| || ||||| || || |
Sbjct 185726 GGTACATATCATCATCATTTTTAGCGAGCTCATAAAATTTATCTGGCACAACCACACCAA 185667
Query 133054 AAGAAAGTGTTTTGATTTG---CTTTGCGGATTCTGCATTTTCTTTTCTAGTTGATAAAA 133110
||||| || || | | | ||| || || || ||||| ||| || | || |
Sbjct 185666 GTGAAAGGGTGTTTACTCGGATTTTTTCG---TCGGCGTTTTCCTTTTTAACTCCCAAGA 185610
Query 133111 AGTCCATAATATCCGCATGGAAAACATTTAGATAGACTGCGCCTGCACCTTGTCTTTGCC 133170
| | || || || | |||||||||| | ||||| || | || ||||| | |||||| |
Sbjct 185609 ATTGAATGATGTCAGGATGGAAAACACTAAGATAAACAACCCCAGCACCGTTTCTTTGGC 185550
Query 133171 CTAATTGATTTGCGTACCGGAAACCATCTTCTAGCATTTTCATAACAGGGACGACACCAC 133230
||| ||| || | || ||||| ||||||||| | ||||| || || | |||||||
Sbjct 185549 CTAGTTGGTTGGAATAGGTGAAACTATCTTCTAGTAACTTCATTACTGGAAGAACACCAC 185490
Query 133231 TACCTGCCCCCTCAATTCCCTTAATAGGGTCACCAAGAGCTCTTAAGTTTGAAAGATTTA 133290
| |||| || | ||| ||||| || |||||| |||||||| ||| |||||||| |
Sbjct 185489 TGGCTGCTCCTTGAATGTGTTTAATGGGATCACCAGCAGCTCTTAGGTTAGAAAGATTAA 185430
Query 133291 TGCCGACTCCTCCGCCAAGTTTAGATAGTTGAAGTGCACTGTTCAACGTTCTACCAATTG 133350
| || |||||||| |||| ||| |||| |||||| || || | |||||||| || |
Sbjct 185429 TTCCAACTCCTCCACCAATTTTGGATAATTGAAGAGCTGAATTAATGGTTCTACCGATCG 185370
Query 133351 AAGACATTGAATCTTCTACTTGAATTAGAAAACAGCTGACAT--ACTCCCCTCTTCTAAG 133408
| ||| ||| |||| || ||||| ||| || |||| || | |
Sbjct 185369 TATTCATGTTATCGGTGGTCTGAAGTAAGAAACA--TGAAATCAACTCACCCCGACGTTT 185312
Query 133409 TCTACCTGCATTTAAAAAAGTAGGGGTTGCAGGTTGGTATCTACGGTTAATTAGCTCATC 133468
| || || || |||||||||||||| |||||||| | | | | ||||| |||||
Sbjct 185311 CTTTCCAGCGTTCAAAAAAGTAGGGGTGGCAGGTTGAAAACGCTGATGAATTAATTCATC 185252
Query 133469 TGCAATCTTCATAGCAAGCTCTTCGTCACCATCACCCATTGTGAGTGCATTAAACGCTAC 133528
|| | |||||||| | | || |||||||| | | | | ||| || | |||
Sbjct 185251 AGCTAGATTCATAGCTAATTTTTGGTCACCATTAGCTAGAAACAATGCGTTCATTGCTGT 185192
Query 133529 TCTATCTTCATAACGCTCTAGGTA----TCGTTCCCCATCATCTGTTTTCATTGCGTATT 133584
| |||| || | |||| ||| ||| || || ||||||||||||||||
Sbjct 185191 CCGATCTATGTAGCCTTCTAAGTACATGGAGTT----GTCGTCAGTTTTCATTGCGTATT 185136
Query 133585 GTTTATAGAAACGGTAAGCCCCCATAAATGTGTCGAATCTGAACTTTTTACTATAGATGA 133644
| |||||| |||||| |||| |||| | ||| || |||| ||||| |
Sbjct 185135 GAGCATAGAACTTGTAAGCAGCCATGAATGATTTGAAGTGAAAATTTTGACTATCCAAAT 185076
Query 133645 ACTTAAATAAtttttttATAAATTCCATTGAGTACTT-GTCAGTAATTACTGTCTTATCA 133703
|||| |||| || | || ||| | || |||||| | | || || ||| |||
Sbjct 185075 ACTTGTATAACTTCTCAATGAATGAAAATGGGTACTTATTGACGAA--ACCCTCT--TCA 185020
Query 133704 ATGTA-TCCTTCTCGAATTAGATAACTAATTTTCTCCTCTAAAGAGTAGAAAAATACTGT 133762
||||| | | || |||||| ||| ||| || | ||| || | || || ||
Sbjct 185019 ATGTAGTTATGCT-TAATTAGGTAATTAAAACGATCTTTTAACGAATCAAACTTAACGGT 184961
Query 133763 GTTCTTGTTTACATGTTCTAAAAAGAATGCTCTAACAGCTTCTTTATCTTTGTCTAACTG 133822
||| || || | |||| |||||| || | | ||||| | |||||| || | ||
Sbjct 184960 ATTCGGATTAACGTTTTCTTTAAAGAAAGCCTTCAGTGCTTCCTGATCTTTTTCCAGTTG 184901
Query 133823 AATCTTTCCGTTATTAGGGATATTCAATTGGTTATTAAG 133861
|||| || | ||||||||| | || ||||| ||
Sbjct 184900 AATCCGGCCATCGACAGGGATATTAATTTCATTATTTAG 184862
>seq16
Length=193047
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 6872 CAGCAAAAGAGTGGATTGCACAACGTGAATCTAGTGGTTCTTATGATGCAACAAATGGTC 6931
|||| |||| ||||| | ||||||||| |||| || || ||| ||||||||
Sbjct 174134 CAGCCAAAGCTTGGATCACTTCACGTGAATCAGGTGGCTCATACACTGCTTCAAATGGTA 174075
Query 6932 AGTATATTGGTCGTTACCAATTATCTGCCTCTTATTTAAATGGTGACTATTCACCTGCCA 6991
| || ||| |||||||||||| || || ||||||||||||||||||| || |
Sbjct 174074 ACTACTACGGTAAGTACCAATTATCTAAGTCATACTTAAATGGTGACTATTCACAAGCTA 174015
Query 6992 ACCAAGAACGAGTAGCTGATGAGTATGTAGCAGGTCGCTATGGCTCATGGGAGAACGCAA 7051
||||||| |||| ||| | | || ||| | || ||||| |||||| |||
Sbjct 174014 ACCAAGATAGAGTTGCTAACCAATACGTAACTTCACGTTATGGTTCATGGAGTGGTGCAC 173955
Query 7052 AATCTTTCTGGTTAGCAAATGGTTGGTACTAAAAT 7086
|||| |||||| | || | |||||||||||| ||
Sbjct 173954 AATCATTCTGGCAATCACACGGTTGGTACTAAGAT 173920
Score = 100 bits (110), Expect = 3e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 6886 ATTGCACAACGTGAATCTAGTGGTTCTTATGATGCAACAAATGGTCAGTATATTGGTCGT 6945
|| |||||| |||||| || || || ||| | |||||||||||| ||||||
Sbjct 100523 ATCGCACAAGTGGAATCTGGTAACTCATACAGTGCCAGAAATGGTCAGTACATTGGTAAA 100464
Query 6946 TACCAATTATCTGCCTCTTATTTAAATGGTGACTATTCACCTGCCAACCAAGAACGAGTA 7005
|||||||||||| | || || |||||||||||||| || || || ||||||||||| |||
Sbjct 100463 TACCAATTATCTTCATCATACTTAAATGGTGACTACTCTCCAGCTAACCAAGAACGGGTA 100404
Query 7006 GCT 7008
|||
Sbjct 100403 GCT 100401
>seq5094
Length=366253
Score = 91.5 bits (100), Expect = 1e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 136980 ATGGACATTGCAGGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAA 137039
|||||| ||| ||| ||||||||| |||||| ||||||||||||| |||||| |||||
Sbjct 1113 ATGGACCTTGTAGGACTCGAACCTACGACCGGACGGTTATGAGCCGTCTGCTCTAACCAA 1054
Query 137040 CTGAGCTAAACGTCC 137054
|||||||||| ||||
Sbjct 1053 CTGAGCTAAAGGTCC 1039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 454473192539520
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