Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4765 316 2e-81
>seq4765
Length=3541379
Score = 316 bits (350), Expect = 2e-81
Identities = 1034/1584 (65%), Gaps = 67/1584 (4%)
Strand=Plus/Plus
Query 93722 ATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTT 93781
||||||||| ||||| || |||||| ||||| | || |||| | || | | ||
Sbjct 3008970 ATTACTTTGGTTTCAAGACCCTGGAGCGTTCGTATTTGCTGAAGAGAAACGGTAAGATTG 3009029
Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841
||||||| ||||| || ||||||||||||| || || || || || || | |||||
Sbjct 3009030 CCGAGCGGCCGCAGCACATGCTGATGCGCGTGGCGATTGGAATCCATGGTGAAGACAT-- 3009087
Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATGCGG------GACA-AGAGGTATACCATG--- 93891
||| ||| | || | ||||||| | | || || | | ||
Sbjct 3009088 CGA------TGCCG-CTGTG-GAGACATACAATTTGTTGTCAGAGCGCTTCTTCACACAC 3009139
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCC 93949
||| | || ||||||||| ||| | || |||| || ||| | || || || ||||
Sbjct 3009140 GCCTCGCCCACCCTGTTCGCCGCTGCCACGAACCGG--CCGCAGCTCTCGTCCTGCTTCC 3009197
Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
| |||| | | | || || ||| || ||||| | | | ||||||| |
Sbjct 3009198 TCCTGACCATGACATCGGATTCGATCGAAGGCATTTTTAAGTCGGTGGAACACTGTGCCA 3009257
Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069
||||| || | ||||| || || || | | |||||| | | ||||||| |||
Sbjct 3009258 TGATCTCCAAGTCGGCGGGCGGCATTGGCCTGAATGTCCATTGCATCCGTGCCAAGGGCA 3009317
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| | ||| | || || |||||||||||||| |||||||| || ||||| || |||||||
Sbjct 3009318 CTTCCATATGTGGCACAAATGGCACCTCCAATGGCCTCGTTCCCATGCTGCGAGTCTTCA 3009377
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
|||| | ||| || ||||||||||||||||| || | | || ||| | || || |||
Sbjct 3009378 ACAATGTGGCTCGGTACGTGGACCAGGGTGGCGGCAAGCGGCCCGGTGCCTTTGCCATCT 3009437
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
|| | |||||||||||| |||| || | ||| | || ||| ||||||| |||||
Sbjct 3009438 ATTTGGAGCCCTGGCACTCGGATGTCTTCGAGTTCTTGGAACTGAAAAAGAACACCGGCA 3009497
Query 94250 ACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306
| || ||||| | || | || || ||||| || |||||| | || || || ||||
Sbjct 3009498 AGGA---GGAGAATCGTGCTCGCGATCTATTCTATGCCCTCTGGATACCCGATCTCTTTA 3009554
Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366
|||| ||||||||| || |||| || | || || | | |||||||| |
Sbjct 3009555 TGAAGCGCGTCGAGGCGAATGAAAACTGGTCCCTAATGTGCCCGCACAAGTGTCCCGGCC 3009614
Query 94367 TGTCCGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425
|| || || || || || | ||||| | |||| | ||||| | ||||
Sbjct 3009615 TGCAGGATGTGTGGGGCGACGAG-TTTGAGAAGCTGTACCTTAAATACGAGGCCGAGGGA 3009673
Query 94426 AAGGCCA---GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482
||||||| ||| |||| | ||| | |||||| ||| | || | |||
Sbjct 3009674 AAGGCCAATCGGACAGTTA---AGGCTCAGTCCCTGTGGTTCGCCATCATCGAGGCGCAG 3009730
Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542
|||||||| || | || ||||| | |||||||| | |||| ||| ||| |||
Sbjct 3009731 GTGGAGACTGGCAATCCGTACATGCTCTTCAAGGATGCGTGCAACAGGAAGAGCAATCAG 3009790
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
||| | | || |||||| || ||||||||||| || || |||||||| | ||
Sbjct 3009791 CAGAATGTGGGCACCATCAAGTGCAGCAATCTGTGCACAGAAATCGTCGAGTACTCCTCG 3009850
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662
|| |||||||| || || || ||||||| |||||| || || || | || | ||
Sbjct 3009851 CCCGACGAGATCGCCGTCTGCAACCTGGCGTCCATC--GCTCTCAACAT--GTTTGTGAC 3009906
Query 94663 GCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG 94722
||| || | ||| |||| | || |||| | | || | | ||
Sbjct 3009907 GCC----CGAAAA----GACGTACGATTTTAAGAAGCTGAAGGAGGTCACCAAGACTGTG 3009958
Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782
| | ||| ||||||| | | || |||| |||| || ||| | |||||||| |||
Sbjct 3009959 GCCAAGAATCTGAACAAGATTATTGACATCAACTATTATCCCCTGCCGGAGGCCAGGAAA 3010018
Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842
|| || ||| |||||| ||||| ||||| ||||| ||||| |||| || || || |
Sbjct 3010019 TCGAATATGAGGCATCGCCCCATTGGCATTGGCGTTCAGGGACTCGCCGATGCCTTGATT 3010078
Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGT---TTGAATTTGAACATATTC 94899
||||| | | |||||||| ||| | ||||||| ||||| | || ||
Sbjct 3010079 CTGATGAGATTCCCCTACGA---AAGCGAGGAGGCGGGTCTCCTGAATCAACAGATCTTT 3010135
Query 94900 GAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGG 94958
|||| || ||||| || ||| | ||| | | || ||| | |||| ||| | ||
Sbjct 3010136 GAAACGATATATTATGGAGCCCTGGAAGCCAGTTGTGAACTGGCCCAGGTCGAA----GG 3010191
Query 94959 GCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCT 95017
|| | ||| | | || || |||| || | |||| || | |||| |||| | |
Sbjct 3010192 CCCGTATGAAAC-CTACGAGGGCAGCCCCGTGAGCAAGGGAATCCTCCAGTACGACATGT 3010250
Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAA 95075
||| | ||| || || | ||||||| ||||| | | || | | ||
Sbjct 3010251 GGGACAAGGTACCCACGAACCTCTGGGACTGGGCAAAGCTGAAGGAATCGA--TCAAGAA 3010308
Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135
|||||| || | |||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 3010309 ACACGGCGTTAGAAACTCTCTGCTCGTGGCCCCCATGCCCACGGCATCCACTGCCCAGAT 3010368
Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195
| ||||||||||| || ||||| || | |||| | || | || | | || || ||
Sbjct 3010369 AATGGGCAACAACGAATCCTTCGAGCCGTACACCACGAATATCTATACACGCCGCGTTCT 3010428
Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255
| |||| ||||||| || ||||| | ||||| | ||||| || || |||| |
Sbjct 3010429 CTCCGGCGAATTCCAGGTGGTCAACCATCACCTATTGCGGGATCTAACTGAGCTGGACTT 3010488
Query 95256 GTGGGGTGACAAGGTCAAGAACCA 95279
||||| ||| | | ||||||||
Sbjct 3010489 GTGGGATGATGACATGAAGAACCA 3010512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494691407850360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |