Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq4968 89.7 5e-13
seq1136 84.2 2e-11
>seq4968
Length=441983
Score = 89.7 bits (98), Expect = 5e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| |||||| |||||||||
Sbjct 13545 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 13604
Query 92675 CCCACTCCCGCCACTAG 92691
|| | ||||| || ||
Sbjct 13605 CCTGCCCCCGCAACCAG 13621
>seq1136
Length=2389
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 1971 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1912
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 1911 CCTATCCCCGCAAC 1898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526564559470320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |