Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq4685 100 2e-16
seq4554 93.3 3e-14
>seq4685
Length=792119
Score = 100 bits (110), Expect = 2e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414
|||||||| |||||||| ||||| | ||||| ||||||||||||| ||| | |
Sbjct 729185 ACGGCCGGAGTCCATCGTCTGTGGTCGCACAAGGCCTACAAGGCCAAGCTGCCGCTGCGC 729126
Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474
| ||||| ||| ||| ||| |||| ||||||| |||| | ||||| |
Sbjct 729125 ATCTTCCTCATGCTGTGCCAGTCGCTGGCCTTCCAGAACAGCATCTGGGAGTGGACCCGT 729066
Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534
|| || | || |||||||||| | | ||||| ||||| || |||||| || | |
Sbjct 729065 GACCATCGCGTGCACCACAAGTTCACGGACACACACGCCGATCCCCACAACTCCCGCCGC 729006
Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGA 108589
|| || | ||| | ||| |||||||||| ||| | ||| ||||||| ||||
Sbjct 729005 GGCTTTTTCTTCGCCCACATGGGATGGCTGATGTGCAAGAAGCACCCCGATGTGA 728951
Score = 89.7 bits (98), Expect = 4e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948
||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||
Sbjct 728591 GGCGAGGGATGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCAGCCGAGCTG 728532
Query 108949 GG 108950
||
Sbjct 728531 GG 728530
>seq4554
Length=542996
Score = 93.3 bits (102), Expect = 3e-14
Identities = 252/381 (66%), Gaps = 6/381 (2%)
Strand=Plus/Minus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525
||||||| ||||| | || |||||||||||||| || ||| || || || || ||
Sbjct 470551 TGGGTGCGTGATCATCGAGTCCACCACAAGTACTCGGAGACGGATGCAGATCCGCATAAT 470492
Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585
|||||| | || |||| || | || ||||| ||||| |||||| |||| | || ||
Sbjct 470491 GCCAACCGTGGCTTCTTCTTTGCCCATGTGGGCTGGCTGATGATGCTCAAGCATCCGGAT 470432
Query 108586 GTGATCTCGGC-CGGTCGAAAAATGGACATGACGGACATATACT--CCGATCCGGTGGTA 108642
||| | || | ||||| |||| |||||||| | |||| || | ||||| ||| ||
Sbjct 470431 GTGCT-ACGTCGTGGTCGTCAAATTGACATGACCG--ATATTCTGGCTGATCCCGTGATA 470375
Query 108643 GTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACCGGTG 108702
| || ||||||||||| || | || | || |||| ||| | | ||
Sbjct 470374 CGTTTCCATCAGAAGTACTTTATACCATTGAAGACCTTTTTCTGCTTTATCCTGCCCACC 470315
Query 108703 TGGGTGCCGGTCGCGTGTTGGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAGGCCGTT 108762
| | |||||| || ||||| ||||| | ||| ||| ||| | ||| ||
Sbjct 470314 GTGATCCCGGTCTACTGCTGGGGTGAGACCTGGGCGCTGGCCTTCATCCAGCAGTGTCTT 470255
Query 108763 CTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTAC 108822
| | |||| || ||| |||||||||||| ||| || || || |||||||
Sbjct 470254 TTCCGTTACGTGAGCAGCCTGAACTTTACGTGGTCGGTGAACAGCGCCGCCCACATGTGG 470195
Query 108823 GGCGACCGTCCGTTCGACAAG 108843
|| |||||| | ||||||
Sbjct 470194 GGATCCCGTCCATATGACAAG 470174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381748879667304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |