Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq4644 89.7 4e-13
>seq4644
Length=1132839
Score = 89.7 bits (98), Expect = 4e-13
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || ||||| || || || || |||||||| ||| ||| | | |||| ||
Sbjct 751831 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCC 751772
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | ||||||||||| || || || ||||| ||||||||
Sbjct 751771 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 751712
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || || || | ||| || || ||||| ||||| ||
Sbjct 751711 ATCTTGGCCTTCACATTCTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTTT 751652
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATA 15186
|| |||| ||||| ||||| || ||||| || ||| ||
Sbjct 751651 CCAGTCAAGGTTTTCACAAAGATCTGCAT-TTCGAATTA 751614
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || ||||| || || || || |||||||| ||| ||| | | |||||||
Sbjct 752288 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCC 752229
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||||||| | ||||||||||| || || || ||||| ||||||||
Sbjct 752228 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 752169
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || || ||| || || || ||||| ||||| ||
Sbjct 752168 ATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTT 752109
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || || |||||
Sbjct 752108 CCGGTAAGAGTCTTCACGAAGATCTGCAT 752080
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| ||||| || || || || |||||||| ||| ||| | | |||| ||
Sbjct 752516 ACCAAATGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCC 752457
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | ||||||||||| || || || ||||| ||||||||
Sbjct 752456 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 752397
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || || ||| || || || ||||| ||||| ||
Sbjct 752396 ATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTT 752337
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| || || ||||| || |||||
Sbjct 752336 CCGGTCAGGGTCTTCACAAAGATCTGCAT 752308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357369607269185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |