Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_012756.1 Length=31276 Score E Sequences producing significant alignments: (Bits) Value seq4953 91.5 3e-14 >seq4953 Length=802672 Score = 91.5 bits (100), Expect = 3e-14 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 8450 GGTGATCGTGAAGCTGATTTTATCAGTTGCATCATGTGGCGTCAACAGGCTGAAAACTTT 8509 |||||||| |||||||| || ||| || | || ||||| || |||||||||||| Sbjct 673193 GGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTT 673134 Query 8510 GCAAATTGGCTTAAAAAAGGTGCTCTTGTAGGAATCACAGGCCGCATCCAGACTCGTAGC 8569 || || | | | || ||| | ||||| |||||| ||| || || ||||| || | Sbjct 673133 GCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAAT 673074 Query 8570 TATGATAATCAGCAAGGCCAACGTGTCTATGTGACAGAAGTGGTAGCTGA 8619 || || || |||| |||||||| || ||||| || ||||| || | ||| Sbjct 673073 TACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTGTTGA 673024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99955497406796