Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_013643.1 Length=36270 Score E Sequences producing significant alignments: (Bits) Value seq5094 86.0 1e-12 >seq5094 Length=366253 Score = 86.0 bits (94), Expect = 1e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 35352 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 35411 ||||| |||||||||||||||||||| || ||||||||| || |||| |||||||||| Sbjct 1039 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 1098 Query 35412 TCCTGTATGGTCCAT 35426 |||| | ||||||| Sbjct 1099 TCCTACAAGGTCCAT 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115935321788944