Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_013645.1 Length=34882 Score E Sequences producing significant alignments: (Bits) Value seq4953 95.1 3e-15 >seq4953 Length=802672 Score = 95.1 bits (104), Expect = 3e-15 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29231 CTTTCAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGTGAAACTGACT 29290 |||| | ||| || ||| ||||| || | || | |||||||| || ||| |||||| Sbjct 673234 CTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACT 673175 Query 29291 TTATCAATTGCGTTATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAGAAAG 29350 | |||| || ||||| ||| || | |||||||||||| || |||| | | || | Sbjct 673174 TCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGG 673115 Query 29351 GAGCATTGATTGGTATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAACAAGGTC 29410 | || | |||| || || || |||||||| || | || || || | || || | Sbjct 673114 GTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCC 673055 Query 29411 AACGTGTTTACGTGACTGAAGTTGTTGCTGAAAACTT 29447 |||| ||||| || || ||||| |||| ||| ||||| Sbjct 673054 AACGAGTTTATGTTACCGAAGTAGTTGTTGAGAACTT 673018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111493992945848